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Species diversity and geographical distribution of marine benthic shell-bearing mollusks around Donghai Island and Naozhou Island, Guangdong Province
Qiyu Kuang, Liang Hu
Biodiv Sci    2024, 32 (5): 24065.   DOI: 10.17520/biods.2024065
Accepted: 28 April 2024

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Aims: Marine benthic shell-bearing mollusks are one of the most important components of marine benthic fauna and one of the key groups influencing marine ecosystem and sediments. The west coast of Guangdong is located in the Northern South China Sea (NSCS) and is rich in marine benthic shell fauna. However, it is also the area with a great lack of surveys of the marine benthic shell fauna, which seriously hinders the development of geographical divisions of offshore benthic fauna. Donghai Island and Naozhou Island have been well studied in terms of marine benthic mollusks. They are also the key areas to reveal the geographical pattern of benthic animals in the NSCS. Here we aim to report on the species diversity and geographical distribution of benthic mollusks found on the coast of the two islands and adjacent waters.

Methods: Based on historical records from previous studies, historical specimens preserved in the collection of the South China Sea Institute of Oceanology, and more than 2,600 specimens collected in 2021-2023 by the School of Geography and Planning, Sun Yat-sen University, an up-to-date checklist of known marine benthic shell-bearing mollusks living around Donghai Island and Naozhou Island was compiled. The geographical distribution patterns of all species were analysed based on their northern limits in the East Asian continental shelf.

Results: A total of 207 species from 144 genera and 73 families were identified in the field collections. Thirty-eight of these were new to the area. So far, a total of 602 benthic mollusks from 330 genera and 115 families have been recorded in the waters around Donghai Island and Naozhou Island, making this area the most species-rich area on the continental coast of the NSCS in terms of marine benthic shell-bearing mollusks. Of the 602 benthic mollusk species, 26.2% were tropical warm-water species, 49.3% were tropical-subtropical warm-water species and 24.4% were eurythermal species. The number of species that were also recorded in the nearshore waters of Hainan, Beibu Gulf and Eastern Guangdong accounted for 89.0%, 80.2% and 80.2% of the total species, respectively.

Conclusion: The results show that the coast of Donghai Island, Naozhou Island and the adjacent waters are rich in marine benthic shell-bearing mollusks. The shell fauna here has typical tropical characteristics and is most closely related to that of Hainan Island. It is recommended that these two areas could be placed in the same ecoregion with regard to the bioregionalization of the coastal and shelf benthic fauna. The present work enriches the benthic shell-bearing mollusks in the sea east of Leizhou Peninsula and provides up-to-date data to support the bioregionalization of benthic fauna in the NSCS.

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New taxa of spiders (Araneae) from the world in 2022
Ruihan Yang, Meichen Yan, Ludan Zhang, Hongxin Liu, Joseph KH Koh, Qiaoqiao He, Zhiyuan Yao
Biodiv Sci    2023, 31 (10): 23175.   DOI: 10.17520/biods.2023175
Accepted: 10 July 2023

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Aim: Notwithstanding talk of a “taxonomic impediment” over the past 30 years, the exponential growth in the global number of newly described spider species during the 1975-2000 period has continued unabated. This paper focuses on the advances in taxonomic studies of spiders in 2022 worldwide, with detailed statistical analyses of new taxa, type localities, arachnologists driving such research, and journals publishing their work.

Progress: A total of 1,177 new taxa (including species in amber) were described in 2022, comprising 81 new genera and 1,096 new species. They belong to 74 families, with type localities spanning across 97 countries and jurisdictions. The new taxa were documented by 340 arachnologists in 289 papers, published separately in 60 journals. Out of these 289 papers, 23 or 8% comprised monographs, regional studies, and revisions of selected higher taxa (at family and genus levels). The proportion of papers incorporating DNA analyses made up 18.3% (totaling 53 papers). China is the country with the highest number of new species discovered, a total of 362, accounting for 33.0% of the global tally. With as many as 75 arachnologists naming new spider taxa, China becomes the country with the highest number of publishing spider taxonomists, accounting for 22.1% of the world’s total. Among them, the most prolific arachnologist is Shuqiang Li who described a total of 194 new taxa, accounting for 16.5% of the new taxa described in 2022 worldwide. Altogether, Li and his remaining 74 Chinese colleagues described a total of 436 new taxa, comprising 26 new genera and 410 new species belonging to 50 families, from China, Myanmar, and eight other countries and jurisdictions. These new taxa described by Chinese arachnologists made up 37.0% of the 2022 global aggregate, an improvement over the Chinese output 2021 (33.8%) and during the 2016-2020 period (28.1% on average).

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Cited: CSCD(1)
  
Advances of marine biogeography in China: Species distribution model and its applications
Yunwei Dong, Menghuan Bao, Jiao Cheng, Yiyong Chen, Jianguo Du, Yangchun Gao, Lisha Hu, Xincheng Li, Chunlong Liu, Geng Qin, Jin Sun, Xin Wang, Guang Yang, Chongliang Zhang, Xiong Zhang, Yuyang Zhang, Zhixin Zhang, Aibin Zhan, Qiang He, Jun Sun, Bin Chen, Zhongli Sha, Qiang Lin
Biodiv Sci    2024, 32 (5): 23453.   DOI: 10.17520/biods.2023453
Accepted: 02 March 2024

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Background & Aim: Marine biogeography is a subject investigating the spatiotemporal distributions of marine organisms and the processes and drivers of changes in species distributions. Research in marine biogeography is promising for the conservation of marine biodiversity and the stability of ecosystem functioning and crucial for the sustainability of utilizing marine resources. Species distribution models (SDMs) are an important tool for assessing and predicting the biogeographical changes in marine species distributions.

Progresses: This review consists of three main parts: (1) the development process and current status of marine biogeography studies in China; (2) the commonly used approaches to answer the questions related to marine biogeography with a special focus on SDMs; (3) the research trends and hotspots of marine biogeography studies in China, mainly concerning the shifts in species distribution under global changes, phylogeography of marine species, biological invasion, population connectivity, marine conservation planning, marine ecological restoration and recovery, adaptation of marine species to extreme environments, as well as management of marine fisheries and mariculture planning.

Prospects: In this review, we further outlined the prospects for the future development of marine biogeography and emphasized the importance of optimizing SDMs. We also called for developing comprehensive databases of marine environments and organisms to strengthen the integration of marine biogeography with other disciplines. We hope this review will provide useful insights for the studies of marine biogeography in China.

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Cited: CSCD(1)
  
Historical review, current status and future prospects of global botanical gardens
Jingping Liao, Dujuan Ni, Tuo He, Hongwen Huang
Biodiv Sci    2023, 31 (9): 23256.   DOI: 10.17520/biods.2023256
Accepted: 16 August 2023

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Background: Botanical gardens have deep historical roots, drawing inspiration from the ancient “Shennong Herbal Garden” that has played a pivotal role in China’s herbal civilization. While the origins of modern botanical gardens can be traced back to the medicinal gardens of early European universities, their predecessors lie in medieval herb gardens, representing the rich heritage and evolutionary path of traditional botany and ancient gardens.

Review findings: Over the course of 500 years since the European Renaissance, modern botanical gardens have evolved into vital centers of science and art. They have transcended their roles as mere repositories of flora and fauna to become institutions that seamlessly blend nature, culture, art and science. These gardens have consistently embraced new challenges, adapted to changing circumstances, and taken on new missions, propelling them into an era of sustainable development, in which multiple models coexist harmoniously and at the heart of this transformation lies the core mission of ex situ conservation.

Recommendations: Looking ahead, the construction of China’s national botanical gardens should focus on creating efficient ex situ conservation networks while adhering to rigorous scientific standards. This entails implementing exemplary professional curation practices that bridge the historical legacy of botanical gardens with contemporary conservation imperatives. Prioritizing ex situ conservation efforts, China’s botanical garden community should curate national living collections and conduct high-level scientific research. This approach should be rooted in a renewed emphasis on the value of ex situ flora, ultimately contributing to the establishment of a world-class national botanical garden system. This system will advance plant conservation research, facilitate resource exploration and application, and foster sustainable economic and social development.

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Cited: CSCD(2)
  
A dataset on inventory and geographical distributions of vascular plants in Shanxi, China
Shuai Li, Weihua Liu, Yudan Xu, Xiaobo Tian, Houjuan Song, Xiaoting Yue, Lingling Wu, Qing Zhang, Tieliang Shanguan
Biodiv Sci    2025, 33 (7): 24317.   DOI: 10.17520/biods.2024317
Accepted: 30 June 2025

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Clarifying the diversity and distribution of wild vascular plants in Shanxi Province is crucial for effective plant diversity conservation efforts in the region. Flora of Shanxi, the most authoritative record of plant cataloging and distribution in Shanxi, has been available for over 20 years. During this period, the plant classification system has evolved significantly, and many new plant records have emerged in Shanxi Province. However, a comprehensive, accurate, and scientific catalog of wild vascular plants remains unavailable. Based on volumes 1-5 of the Flora of Shanxi, this study comprehensively collected relevant literature on vascular plant research in Shanxi since 1980. Using extensive field investigations and related research data collected by the authors in Shanxi Province, the wild plant list was reviewed and refined, including revisions to plant names, protection status, and distribution down to the county level. This dataset presents the latest catalog of wild vascular plants in Shanxi, divided into confirmed and doubtful species lists. As of June 26, 2024, this dataset included 2,438 species, 73 subspecies, 229 varieties, and 4 forms across 147 families and 763 genera. The dataset included lycophytes and ferns (117 species, 4 varieties in 15 families and 34 genera), gymnosperms (13 species, 4 varieties in 4 families and 8 genera), and angiosperms (2,308 species, 73 subspecies, 221 varieties, and 4 forms in 128 families and 721 genera). Additionally, 36 species, 4 varieties in 19 families and 27 genera were listed in List of Key Protected Wild Plants in China (2021), and 119 species, 1 subspecies, and 2 varieties in 47 families and 80 genera were listed in List of Key Protected Wild Plants in Shanxi Province (Jin Zheng Han [2023] No. 126). Further work should prioritize species with limited distribution data and species of concern to further enhance catalog plan in Shanxi Province. This research can provide fundamental data for updating the Flora of Shanxi and advancing plant diversity conservation strategies within Shanxi Province.

Database/Dataset Profile

Title A dataset on inventory and geographical distributions of vascular plants in Shanxi, China
Data author(s) Shuai Li, Weihua Liu, Yudan Xu, Xiaobo Tian, Houjuan Song, Xiaoting Yue, Lingling Wu, Qing Zhang, Tieliang Shanguan
Data corresponding author Tieliang Shanguan (sgtl_55@163.com)
Time range 1980-2024
Geographical scope Shanxi
File size 571 KB
Data volume 3,078 records
Data format *.xlsx
Data link https://doi.org/10.57760/sciencedb.27756
https://www.biodiversity-science.net/fileup/1005-0094/DATA/2024317.zip
Database/Dataset composition The dataset includes 2 data tables (confirmed and questionable species), containing a total of 3,078 records (2,744 confirmed and 334 questionable) across 22 fields. The 22 fields are as follow: sequence number, main categories of vascular plants, family number, Chinese family name, family, genus number, Chinese genus name, genus, species number, Chinese name, scientific name, author, scientific name in data sources, rank, reference for taxonomic treatment, status, data source, distribution, rank in List of Key Protected Wild Plants in China (2021), whether it is affiliated with List of Key Protected Wild Plants in Shanxi Province, specimen voucher museum collection barcode/journal source, specimen collector/collection number.
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Whole genome resequencing approach for conservation biology of endangered plants
Zhaoyang Jing, Keguang Cheng, Heng Shu, Yongpeng Ma, Pingli Liu
Biodiv Sci    2023, 31 (5): 22679.   DOI: 10.17520/biods.2022679
Accepted: 21 March 2023

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Background & Aims: Increasing attention is focused on global change and loss of biodiversity. Genetics is an important tool in the conservation of threatened species, which have greatly promoted our understanding of diverse areas in conservation biology. However, some key scientific issues in conservation biology, including evolutionary history, endangered mechanism, genetic basis of adaptive evolution and inbreeding depression, are remain to be understood. Spurred by technological advances in high-throughput sequencing, conservation genomics are developed by using of new genomic techniques to solve problems in conservation biology, providing new approaches to deep understanding of the key issues in conservation biology. This paper briefly summarizes the important research progress in the conservation genomics based on whole genome resequencing, aiming to promote the conservation biology of threatened plant in China.
Progress: Whole genome resequencing, being the highest genomic resolution among current methods in conservation genomics, has made many significant advancements, including classification of phylogenetic relationships between unresolved taxa, the reconstruction of population structure, genomic diversity, demographic history, adaptive evolution and inbreeding depression. Based on these advancements, conservation taxa and conservation units are identified, the evolutionary history and endangered causes of species are revealed and the genetic basis of adaptive evolution and inbreeding depression are partly revealed.
Prospect: As whole-genome resequencing provides deep insights into the key issues in conservation biology, with the improvements of even higher throughput and lower cost, whole-genome resequencing will be a routine task in conservation biology studies.

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Cited: CSCD(1)
  
Application of large language models in biodiversity research
Jiqi Gu, Jianping Chen, Jiangshan Lai
Biodiv Sci    2024, 32 (9): 24258.   DOI: 10.17520/biods.2024258
Accepted: 09 August 2024

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Background & Aims: With the development and advancement of artificial intelligence technology, large language models (LLMs), such as Kimi Chat, have begun to play a significant role in biodiversity research. LLMs’s deep learning and natural language processing technologies, augmented by human feedback reinforced learning (RLHF) and proximal policy optimization (PPO), offer new avenues for handling and analyzing large biodiversity data sets.
Progresses: We explore the application of LLMs, taking Kimi Chat as an example, in investigating biodiversity research questions, reviewing literature, designing hypotheses, organizing and analyzing data, and writing research papers, as well as its potential to enhance research efficiency and quality. (1) LLMs can quickly process vast amounts of scientific literature, helping researchers distill key information and swiftly catch up with the latest research trends in specific fields. (2) LLMs can also assist researchers in formulating research hypotheses and designing experimental protocols, thereby providing abundant scientific inspiration, broadening research perspectives, and enhancing the efficiency of the initial stages of research. (3) In terms of research design, LLMs can offer advice on data collection methods, design of experiment, and statistical analyses to ensure the scientific validity and the logic of the research design. (4) LLMs can assist in scientific writing and peer review processes by helping draft scientific papers and providing suggestions for revision and polishing to enhance the quality and readability of the papers, and it also supports researchers in understanding and responding to peer review comments and optimizing the presentation of research findings. We also discuss the challenges and limitations encountered during using LLMs, such as the need for professional judgment, the homogenization of research methods, the accuracy of data and results, and ethical issues. Additionally, we propose strategies for integrating this technology with traditional biodiversity research methods in the future.
Prospects: We demonstrates how LLMs can aid in biodiversity research, thus advancing scientific discovery and ecological conservation strategies.

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Cited: CSCD(1)
  
A checklist of vascular plants in Fujian Province, China
Chang An, Yixue Zhuang, Ping Zheng, Yanxiang Lin, Chengzi Yang, Yuan Qin
Biodiv Sci    2023, 31 (6): 22537.   DOI: 10.17520/biods.2022537
Accepted: 28 April 2023

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Aims: To comprehensively understand the current status of vascular plants and provide background materials for the conservation of plant diversity in Fujian Province, the list of vascular plants in the region needs to be updated. This study revises and updates the species list of vascular plants in Fujian Province in the post-flora era.

Methods: Based on Flora of Fujian, we refered to related literature, examined herbarium specimens, consulted relevant lists and databases, and incorporated the results of field investigations conducted by the authors and other front-line peers. The checklist of vascular plants in Fujian Province was sorted according to the latest classification systems of vascular plants (APG IV system, Yang system, and PPG I system). The list included the family and genus information, Chinese name and Latin name, and the county and city distribution information data sources for each species.

Results: In total, there were 5,587 species belonging to 256 families and 1,807 genera of wild, naturalized, and cultivated vascular plants in Fujian Province (wild: 231 families, 1,402 genera, and 4,550 species). This included 414 species of lycophytes and ferns belonging to 102 genera and 32 families, 76 species of gymnosperms belonging to 38 genera and 10 families, and 5,097 species of angiosperms belonging to 1,667 genera and 214 families, respectively. Compared with Flora of Fujian, 8 families, 216 genera, and 1,107 species were newly added. The five largest families of lycophytes and ferns species were Dryopteridaceae (67), Polypodiaceae (51), Pteridaceae (51), Thelypteridaceae (42), and Athyriaceae (38). Among the gymnosperms, the families and the genera with the largest number of species were Cupressaceae (15 genera, 25 species) and Pinus (14 species), respectively. The top 10 largest families of angiosperms are Poaceae (452), Leguminosae (305), Compositae (279), Orchidaceae (244), Cyperaceae (225), Rosaceae (198), Labiata (188), Rubiaceae (126), Malvaceae (85), and Lauraceae (80), with a total of 2,180 species, accounting for 39.0% of the total number of vascular plant species in Fujian Province. The top five largest genera were Carex (94), Rubus (58), Ilex (54), Phyllostachys (38) and Persicaria (36).

Conclusions: This work improves the species distribution profile and specimen information, thus providing basic information for the survey, assessment, and conservation of plant diversity in Fujian Province. Additionally, this study can be used to further develop botany-related disciplines, and the revision of Flora of Fujian.

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Cited: CSCD(1)
  
Spatial differentiation of fish functional groups in the Yangtze River
Anlun Wang, Ping He, Xinyuan Long
Biodiv Sci    2023, 31 (10): 23095.   DOI: 10.17520/biods.2023095
Accepted: 22 July 2023

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Aim: The composition of fish in large rivers exhibits longitudinal variation along the river influenced by environmental gradients. The River Continuum Concept revolutionized the understanding of river ecosystems by linking changes in river macro-invertebrate trophic functional groups to the differentiation of nutrient sources between upstream and downstream areas. The concept offers a novel framework for studying the distribution patterns of river biomes at large scale, from upstream to downstream. In this study, a dataset encompassing 168 species of fish were used, covering the entire range from Zhimenda, the starting point of the Jinsha River, to the estuary. Functional groups were first classified based on criteria such as body sizes, shapes, feeding habits, and life-history strategies. Subsequently, their distribution patterns as well as their adaptability to environmental factors were investigated across different scales.

Methods: A total of 14 functional groups and 59 combined function groups were classified, and 5 environmental factors were selected: elevation, mean temperature, mean annual temperature range, river width and river slope gradient. The distribution pattern of fish functional groups was analyzed using hierarchical clustering, while ordination analysis was applied to analyze the relationship between environmental factors and fish functional groups at different scales.

Results: The results revealed a primary and secondary differentiation in the distribution of fish functional groups within the Yangtze River: the primary differentiation occurs at Longkaikou, acting as the dividing point, while the secondary differentiation is observed at Shigu, Longkaikou and Downstream of Baihetan Dam. Moving from the upstream to the downstream, fish body sizes transition from small to medium and large, body shapes shift from predominantly fusiform and cylindrical to include compressform appearances. Feeding habits evolve from primarily omnivorous to encompass a more diverse range of feeding functional groups, and life-history strategies transform from opportunistic to periodic and equilibrium strategies. The distribution pattern of fish functional groups is a result of adaptation to spatial differentiation of environmental factors at different scales. Across the larger scale of the entire Yangze River, elevation and temperature, which are associated with climatic features, serve as dominant factors; whereas, as the spatial scale of the study shrinks, the influence of river slope drop associated with topographic features, becomes more prominent and plays the most important role in the I-1 river section at medium scale.

Conclusion: The distribution pattern of fish functional groups is direct outcome of the fish adaptation to environmental differentiation. Furthermore, the specific environment factors that determine the distribution of fish functional groups vary at different scales, consequently affecting the corresponding functional traits of the fish. This study contributes to our understanding of the river continuum theory, the spatial distribution pattern of fish in the Yangtze River, and the environmental adaptation characteristics of fishes.

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A dataset of the morphological, life-history, and ecological traits of snakes in China
Jiang Wang, Yifan Zhao, Yanfu Qu, Caiwen Zhang, Liang Zhang, Chuanwu Chen, Yanping Wang
Biodiv Sci    2023, 31 (7): 23126.   DOI: 10.17520/biods.2023126
Accepted: 12 July 2023

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As of January 2023, China has a total of 312 snake species, establishing itself as one of the most diverse countries in terms of snake biodiversity worldwide. The characteristics exhibited by snakes hold significant sway over their survival within their respective environments, making them an important role in the study of their evolutionary biology, ecology, and conservation biology. However, a comprehensive dataset encompassing the morphological, life-history, and ecological traits of Chinese snakes has yet to be established. Therefore, the primary objective of this study is to provide a comprehensive dataset comprising the various traits exhibited by Chinese snakes. To accomplish this goal, we conducted a systematic collection of data from a range of sources, including published snake books, the peer-reviewed and non-peer-reviewed literatures, as well as the Reptile Database (https://reptile-database.reptarium.cz/). Our data compilation encompasses 41 distinctive traits, which were classified into three main types: morphological traits (25 traits such as scales and teeth), life-history traits (11 traits such as body length, diet, foraging mode, reproductive modes, clutch size, egg size, activity time, and venomousness), and ecological traits (5 traits such as Chinese/island endemism, adult habitat, geographical and elevational distributions). Among all these 41 traits, apart from geographical distribution, mental and rostral scales, which are 100% complete, the data on other traits were incomplete to varying degrees, ranging from 7.72% to 99.70%. This dataset is the most up-to-date and comprehensive collection of Chinese snake traits available to date. It provides a unique and invaluable resource for exploring the evolution, biogeography, ecology, and conservation biology of Chinese snakes.

Database/Dataset Profile

Title A dataset of the morphological, life-history and ecological traits of snakes in China
Authors Jiang Wang, Yifan Zhao, Yanfu Qu, Caiwen Zhang, Liang Zhang, Chuanwu Chen, Yanping Wang
Corresponding author Yanping Wang (wangyanping@njnu.edu.cn)
Time range Until January 2023
Geographical scope The People's Republic of China, including Taiwan, Hongkong, and Macao
File size 610 KB
Data format .xlsx
Data link http://dataopen.info/home/datafile/index/id/288
http://doi.org/10.24889/do.202305002
https://www.biodiversity-science.net/fileup/1005-0094/DATA/2023126.zip
Database/Dataset composition The dataset provided in this study consists of one data file and two descriptive files in total. It comprises 41 distinct species characteristics, covering all 312 snake species found in China.
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Cited: CSCD(1)
  
Additions to the seed plant flora in Yunnan, China
Hongbo Ding, Liyan Wang, Dongli Quan, Bin Yang, Mamai Yue, Pingyuan Wang, Yongjingwen Yang, Qiangbang Gong, Shishun Zhou, Li Wang, Jianwu Li, Yunhong Tan
Biodiv Sci    2023, 31 (10): 23254.   DOI: 10.17520/biods.2023254
Accepted: 09 October 2023

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Aim: The study aims to better understand plant diversity in the border areas of Yunnan. These border areas have relatively intact forest ecosystems but are poorly explored.

Methods: In this study, plants were collected and photographed through intensive field investigation, made into specimens, sorted and identified. The voucher specimens for each recorded species were deposited in the Herbarium of Xishuangbanna Tropical Botanical Garden of Chinese Academy of Sciences (HITBC), Herbarium of Institute of Botany of Chinese Academy of Sciences (PE), Herbarium of Kunming Institute of Botany of Chinese Academy of Sciences (KUN) and Herbarium of Xiamen University (AU).

Results: One new record family, namely Aptandraceae (Anacolosa griffithii), two new record genera, namely Pottingeria (P. acuminata), Cordisepalum (C. phalanthopetalum), thirty new record species, namely Phlogacanthus gomezii, Staurogyne shanica, Hydnocarpus macrocarpus, Alphonsea ventricosa, Huberantha jenkinsii, Miliusa chantaburiana, M. dioeca, Impatiens andersonii, Garcinia lanceifolia, Dillenia parviflora, Parashorea buchananii, Castanopsis birmanica, Heritiera burmensis, Phrynium pubinerve, Bulbophyllum obrienianum, B. sinhoense, Dendrobium dantaniense, D. parcum, Epipactis flava, Eulophia macrobulbon, Micropera mannii, Vanilla borneensis, Phyllanthus discofractus, P. mirabilis, Maesa tomentella, Sabia wardii, Ailanthus integrifolia subsp. calycina, Wikstroemia floribunda, Hedychium gardnerianum, Monolophus linearis, were reported for the flora of China.

Conclusion: The border area of Yunnan possesses one of the richest floras in China, but the floristic survey in this area is still inadequate. Therefore, intensive floristic surveys are needed to be strengthened in the future to obtain reliable information on the flora of the border areas of Yunnan.

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Cited: CSCD(3)
  
A comparative analysis of the List of State Key Protected Wild Animals and other wildlife protection lists
Jinfeng Chen, Xinjing Wu, Hai Lin, Guofa Cui
Biodiv Sci    2023, 31 (6): 22639.   DOI: 10.17520/biods.2022639
Accepted: 25 May 2023

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Aims: The List of State Key Protected Wild Animals is a crucial legal foundation that guides the implementation of species conservation efforts, especially rescue plans for endangered species. The recently published and implement 2021 version of the List of State Key Protected Wild Animals, represents the first major revision in 32 years and is of immense importance for biodiversity conservation in China. Our study aims to assess the efficacy of its species conservation measures dictated by the List, offer insights, and aid future revisions.

Methods: Our study has summarized and organized a total of 1,520 species (with subspecies) based on the new version of the List of State Key Protected Wild Animals. We then selected four wildlife lists that are representative and relevant to conservation and conducted a statistical analysis of the conservation status and level of threat for the same species across different lists.

Results: The results indicate that the new version of the List of State Key Protected Wild Animals has broadened the scope of wildlife protection by adding 1,038 species to the previous list of 482 species (with subspecies) which was compiled in 1989, as we previously summarized. Of the new additions, 43 species have been categorized as national category I and 995 as national category II. Moreover, the protection category of some species has also been revised (3 species downgraded to national category I, 66 species upgraded to national category II, and 413 species in total maintaining the same category). However, despite these positive changes, according to China’s Red List of Biodiversity: Vertebrates (2021 Edition) more than half of the endangered species in China are still not covered in the new version of the List of State Key Protected Wild Animals.

Conclusion: To promote the comprehensive and effective protection of endangered species in China, it is recommended that future adjustments to the List of State Key Protected Wild Animals give comprehensive attention to the endangered species on the list. If species in the Critically Endangered and Endangered categories are listed as national category I key protected wildlife, the existing 164 national category II key protected wildlife should be upgraded to national category I key protected wildlife, and 162 new wildlife species should be added to national category I key protected wildlife. Additionally, if species in the Vulnerable category are listed as national category II key protected wildlife, 340 new national category II key protected wildlife should be added. A comprehensive database of the List of State Key Protected Wild Animals can be established to achieve standardized and dynamic management of the list.

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Cited: CSCD(1)
  
Functional diversity and regulation of cuticular hydrocarbons in social insects
Liu Zhixiang, Xie Hua, Zhang Hui, Huang Xiaolei
Biodiv Sci    2025, 33 (2): 24302.   DOI: 10.17520/biods.2024302
Accepted: 20 March 2025

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Background & Aims: Cuticular hydrocarbons (CHCs), widely present in the insect epicuticle, provide significant contributions to many terrestrial insect adaptations. Insect CHCs function primarily in waterproofing, resisting harmful substances, and facilitating chemical communication. Compared to the compositional and functional diversity of CHCs in solitary or subsocial insects, the diversity of social insects offers a valuable source of insights into their unique genetic structure, population composition, and characteristic behavioral patterns.

Progresses: This review characterizes the structures and properties of CHCs that enable particular functions, summarizes their functional diversity, and discusses the influence of both endogenous factors and external elements on the profile variability of CHCs in social insects. Furthermore, potential future research directions are proposed. The CHCs in social insects are regulated through nestmate recognition, caste differentiation, division of labor, social immunity, reproductive state recognition, and inter-specific interactions. Remarkably, some CHCs have been designated for queen pheromones. The CHC profiles of social insects can exhibit remarkable variability to meet the demands of functional differentiation. The synthesis, composition, and content of CHCs in social insects can be influenced by a wide range of internal factors (including gene and hormone levels) as well as extrinsic factors (including diet, gut microbiome, pathogenic organisms, temperature, humidity, ultraviolet radiation, nest materials, etc.).

Prospects: Emerging technologies, such as the quantitative genetic framework, immunohistochemical localization, and fluorescent in situ hybridization, will enable new insights to be obtained into the synthesis, translocation, release, functional diversity, and regulation of CHCs, enhancing our understanding of their role in insect adaptive evolution. The research discussed in this review can provide a theoretical basis for the development of novel technologies to control invasive agroforestry pests.

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2022 annual report on new taxa and nomenclatural changes of Chinese plants
Cheng Du, Jun Liu, Wen Ye, Shuai Liao
Biodiv Sci    2023, 31 (10): 23244.   DOI: 10.17520/biods.2023244
Accepted: 30 November 2023

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Aim: Plant species names undergo revisions and changes in response to deepening taxonomic research deepens and new discoveries. These valuable diverse pieces of information are scattered across various publications, requires necessitate timely consolidation into the Species Catalogue of China, under the guidance of taxonomic experts. To address this requirement, it is necessary to create a dataset containing information on new taxa, name changes, and the latest statuses of plants in China.

Methods: We collected data on newly discovered taxa and name changes for Chinese higher plants by reviewing 228 journals and monographs. This compilation involved 403 articles from 62 journals and 1 monograph, focusing on the new taxa and nomenclatural changes of higher plants in 2022.

Results: In 2022, China reported a total of 318 new taxa of higher plants, encompassing 12 new genera, 286 new species, 3 new subspecies, 10 new varieties, and 7 new forms. The recently described species fall into bryophytes (15 taxa), pteridophytes (28 species), gymnosperm (1 species), and angiosperms (362 taxa). Notably, 155 newly identified species have been published with detailed evidence covering molecular systematics, chromosomes, micromorphology, genome, etc. Among these, 92 species were considered as threatened according to IUCN standards. The majority of these discoveries originate from five southwestern provinces in China, namely Yunnan, Sichuan, Xizang, Guangxi, and Guizhou. Medog, a county-level unit, recorded the highest number of newly discovered species in 2022. Furthermore, 122 new combinations and 11 replacement names were transferred from other species. Additionally, 103 names were designated as synonyms for 76 taxa, while 4 names were re-accepted.

Conclusion: In 2022, China witnessed a net increase of 346 new taxa of higher plants, accounting for 0.89% of the total Chinese plant species. Additionally, 240 names of higher plants underwent changes, accounting for 0.62% of the total. These changes represented 1.5% of all Chinese plant names modified in 2022, encompassing both species additions and nomenclature treatments.

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Cited: CSCD(1)
  
A practical guide for estimating the density of unmarked populations using camera traps
Zhenzhen Li, Mengtian Du, Yuanxin Zhu, Dawei Wang, Zhilin Li, Tianming Wang
Biodiv Sci    2023, 31 (3): 22422.   DOI: 10.17520/biods.2022422
Accepted: 20 March 2023

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Background & Aim: Estimating population density is essential for wildlife management and conservation, but it is challenging to achieve. Camera trapping is a pervasive method used in mammal surveys and a cost-effective way to overcome this challenge, for which several methods have been described to estimate population density when individuals are indiscernible (i.e. unmarked populations). However, there are few examples of their use in China. We aim to provide a practical guide for conducting camera trap surveys to estimate the density of mammals applying the random encounter model (REM), random encounter and staying time (REST) model, time in front of the camera (TIFC) model and the camera trap distance sampling (CTDS).

Review Results: First, we provide a brief explanation about the structure and assumptions of the REM, REST, TIFC and CTDS models. Next, we describe essential steps in planning a field survey: determination of objectives, design of camera placement, and the layout of the camera station. We then develop detail-oriented instruction for conducting a field survey and analyzing the obtained visual data. Finally, for each analytical approach, we compiled the data requirements, advantages, and disadvantages of each to help practitioners navigate the landscape of abundance estimation methods.

Perspectives: Although multiple methods exist, no one method is optimal for every camera-trap data scenario. While there has been rapid improvement of camera traps in recent decades throughout China, we encourage researchers to evaluate the life history of the focal taxa, carefully define the area of the sampling frame, and enhance the use of camera trapping for estimating densities of unmarked populations.

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Cited: CSCD(1)
  
Kunming-Montreal Global Biodiversity Framework: An important global agenda for biodiversity conservation
Keping Ma
Biodiv Sci    2023, 31 (4): 23133.   DOI: 10.17520/biods.2023133
Accepted: 28 April 2023

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Cited: CSCD(16)
  
Species diversity, ecological characteristics and conservation measures of seahorses (Hippocampus) in China’s waters
Cailian Liu, Xiong Zhang, Enyuan Fan, Songlin Wang, Yan Jiang, Baian Lin, Lu Fang, Yuqiang Li, Lebin Liu, Min Liu
Biodiv Sci    2024, 32 (1): 23282.   DOI: 10.17520/biods.2023282
Accepted: 10 January 2024

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Background & Aims: Seahorses (Hippocampus spp.) are well-known fishes from the family Syngnathidae, mainly due to their unique external morphology and reproductive strategy of male pregnancy. All Hippocampus species, listed in CITES Appendix II in 2002, are under trade regulations internationally. All Hippocampus species (wild populations only) inhabiting in China’s waters were listed as Category II of the National Key Protected Wild Animals in 2021. Through literature review, we (i) updated the species list of seahorses occurring in China’s waters, (ii) summarized their distribution regions, habitat and breeding features, and (iii) presented their threatened categories and threats. Our goal is to inform effective conservation measures for seahorse wild populations in China.

Review findings: In this paper, we reviewed and summarized seahorse species diversity, distributions, habitat uses, reproductive features, threatened categories, and threat factors from various reference sources, including online databases (Fishbase, The Fish Database of Taiwan, GBIF, WoRMS, IUCN), peer-reviewed papers, reports, theses, as well as informative Chinese ichthyographies. A total of 16 seahorse species were recorded in China’s waters, including 5 pygmy seahorses that are no more than 30 mm in body height. Among these, Japanese seahorses (H. mohnikei) were distributed most widely, across China’s all four seas. Crowned seahorses (H. coronatus) were only found in the Bo Hai, while Barbour’s seahorses (H. barbouri), Beibu Bay seahorses (H. casscsio, a new species found in 2016), and Tiger tail seahorses (H. comes) were only found in the South China Sea. Six species were only found in the coastal waters of Taiwan Province. Southern China, including Taiwan, Hainan, Guangdong, Fujian, and Guangxi, has high seahorse species diversity. The habitat uses of seahorses in China’s waters are very diverse, including coral and rocky reefs, seagrass and seaweed beds, muddy and sandy bottoms, gravels, and mangrove meadows. Some species have special requirements for their habitats. According to IUCN, 8 seahorse species were listed as Vulnerable (VU), 2 species were listed as Least Concern (LC), 5 species were listed as Data Deficient (DD), and 1 species was Not Evaluated (NE). The main threats to seahorses are bycatch and habitat destruction.

Recommendations: Seahorses are a special taxonomic group of fishes with high vulnerability, and we propose five recommendations for urgent conservations of seahorses in China. First, the significance of seahorses as flagship species in marine biodiversity conservation should be realized and we need to use them to raise marine-conservation awareness of the general public. Establishing marine protected areas for seahorses and their habitats, and applying other effective area-based conservation measures (OECMs) might also be taken into account. Second, it is known that non-selective fishing gears such as bottom trawling have high seahorse bycatch volume, and the dredge net operations can damage seaweed beds where seahorses inhabit. Therefore, any solution for reducing bycatch, increasing survival rates of seahorses after releasing, protecting habitats and innovating fishing gears are welcome. Third, identifying the key habitats of different seahorse species in China’s waters is very important for establishing protected areas and fisheries spatial management. Currently, such data are very limited. Some key areas we synthesized in this study require national-wide surveys to validate before planning for marine reserves and OECMs of seahorses in China. Fourth, seahorse trade regulation and enforcement should be strengthened, and the management of seahorse utilization should be regulated properly. To this end, techniques to distinguishing wild populations from farmed seahorses should be established as soon as possible before the expansion of seahorse aquaculture.

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Progress and prospect of Chinese biodiversity monitoring of amphibians and reptiles
Cheng Li, Jianping Jiang, Feng Xie, Tian Zhao, Jing Che, Yiming Li, Weiguo Du, Weikang Yang, Feng Xu
Biodiv Sci    2023, 31 (12): 23382.   DOI: 10.17520/biods.2023382
Accepted: 05 January 2024

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Background & Aims: Amphibians and reptiles are important indicators of ecosystem health, and they are vulnerable to changes in the environment. Many of their populations are undergoing rapid decline and species extinction in the worldwide. A recent assessment of Red List of China’s Vertebrates found that 37.05% of amphibians and 30.5% of reptiles are threatened. Therefore, building a national biodiversity monitoring network, to research and analyze the trend and threats of amphibians and reptiles is a prerequisite for conservation. As part of the Chinese Biodiversity Monitoring and Research Network (Sino BON), the Sino BON-Amphibian & Reptile has covered 11 key areas with rich biodiversity and high habitat heterogeneity across China. This program aims to combine intensive field surveys and ecological modeling techniques to evaluate population dynamics and community structures of amphibian and reptile species in the study areas.

Review Results: Currently, the Sino BON-Amphibian & Reptile adheres to focusing on the research of amphibian and reptile diversity. A total of 16 species were newly discovered in China, including 13 new species and 3 national new record species. Significant progress has been made in the national need for the protection of Critically Endangered amphibian (CR) Chinese giant salamander (Andrias davidianus) and Endangered (EN) amphibian Taliang crocodile newt (Liangshantriton taliangensis), the environmental DNA (eDNA) technology and radio tracking technology applied in wild, the ecological impact of desertification habitats on reptiles, and invasive alien species, which have provided strong scientific support for protecting biodiversity of amphibians and reptiles in China.

Prospects: For further progresses, it is still necessary to continuously enhance monitoring and research on amphibians and reptiles, strengthen monitoring network construction and application of advanced technologies, emphasize the protection of amphibians and reptiles from the level of laws and regulations, establish and optimize the protected areas, and implement the necessary ex situ and in situ conservation, so as to achieve more effective protection of rare amphibian and reptile resources.

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Analysis of the main elements and implications of the Kunming-Montreal Global Biodiversity Framework
Jing Xu, Jinzhou Wang
Biodiv Sci    2023, 31 (4): 23020.   DOI: 10.17520/biods.2023020
Accepted: 27 March 2023

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Background & Aim: The Conference of the Parties to the Convention on Biological Diversity adopted a new global biodiversity strategy—the Kunming-Montreal Global Biodiversity Framework (the Kunming-Montreal GBF). The following five package outcomes were also adopted: Monitoring Framework; Mechanisms for Planning, Monitoring, Reporting and Review; Resource Mobilization; Capacity-Building and Development, Scientific and Technological Cooperation; and Genetic Resources Digital Sequence Information. Parties to the Convention need to implement the Kunming-Montreal GBF and its package of outcomes domestically. In order to facilitate China’s implementation of the Kunming-Montreal GBF, the paper briefly reviews the development process and the main contents of the Kunming-Montreal GBF and its package of outcomes.

Review Results: Comments on the global and national impact of the Kunming-Montreal GBF are given. In order to implement the Kunming-Montreal GBF, developed countries should enhance biodiversity financing and ensure the level of international funds related to biodiversity flowing to developing countries. Developing countries should revise or update national biodiversity strategies and action plans, monitor and report national implementation progress by using indicators, and accept review. China should host the inter-sessional process of the CBD and facilitate the implementation of the package deals of the Kunming-Montreal GBF.

Recommendations:Recommendations on how to implement the Kunming-Montreal GBF in China are provided: updating and revising the national biodiversity strategic action plan, formulating laws and policies to promote biodiversity mainstreaming, strengthening monitoring and evaluation of national implementation progress, promoting the development of biodiversity financing tools, and establishing partnerships with broad participation by the entire society.

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Cited: CSCD(13)
  
The impact of anthropogenic noise, artificial light at night and road kills on amphibians
Yixin Jiang, Yingying Shi, Shuo Gao, Supen Wang
Biodiv Sci    2023, 31 (3): 22427.   DOI: 10.17520/biods.2022427
Accepted: 01 January 2023

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Background & Aim: Global biodiversity decline is a major ecological problem around the world today. As an important indicator for measuring the environment, amphibians have received more and more attention from researchers in recent years. In this paper, we focus on amphibians which are the most threatened species of vertebrate to analyze the existing problems and suggest the corresponding solutions.

Method: Firstly, we analyze the effects of three most prominent factors in human activities, i.e., anthropogenic noise, artificial light at night and road kills on amphibians reproduction, population growth rate, physiology, and behavior by retrieving existing literature from 2003 to 2021, and extracting and integrating key words. Secondly, the mitigation measures regarding anthropogenic noise, artificial light at night and road kills are summarized and suggestions for improvement are made.

Review Results: Amphibian calling behavior was altered by anthropogenic noise, showing variations in call rate, dominant frequency, and call duration. It is yet unclear how different amphibians calling respond to anthropogenic noise differently and whether call variations are advantageous to the amphibians’ long-term growth. By obscuring the perception of male acoustic signals by females and impacting sperm count and sperm viability in males, anthropogenic noise can also affect the reproductive behavior of amphibians. Amphibian growth rates and behavioral activity time were slowed down by artificial light at night. In addition, artificial light at night can change corticosterone levels in amphibians and hence have an impact on their physiology. Amphibian population size was directly impacted by road kills. This study makes recommendations for improvement in light of the aforementioned detrimental effects, including bolstering the road infrastructure, constructing noise barriers to muffle noise, reducing light intensity in dense amphibian areas, building amphibian corridors, etc.

Perspective: Specific conservation strategies that seek to improve protection measures, planning management and monitoring of amphibian population dynamics should be implemented in order to reduce the impact of human activities on this group of vertebrates.

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Cited: CSCD(1)
  
Ecological impacts of centralized large-scale photovoltaics and wind farms: Progress and prospects
Yunyue Peng, Yongmei Luo, Zenan Xu, Tong Jin
Biodiv Sci    2024, 32 (2): 23212.   DOI: 10.17520/biods.2023212
Accepted: 07 December 2023

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Background and AimsDriven by China’s carbon neutrality goals, renewable energy is growing drastically, spurring the large-scale development of photovoltaics (PVs) and wind power. Despite this prevalence, systematic reviews detailing the ecological concerns associated with these technologies are scarce.

Method We provide an overview of domestic and international research on the environmental impact of centralized PV and onshore wind farms, focusing on species diversity and ecosystem services.

Results PVs and wind farms both alter climate factors, including temperature, humidity and wind speed. The construction of PVs and wind farms damages vegetation, causing soil erosion and water loss. Construction also results in solid waste and wastewater, contributing to pollution around the site. The ecological impact of PVs is mainly reflected by changes in vegetation and habitat quality, which can have adverse effects on certain species. In relatively arid areas, PVs can play a role in lowering temperatures and increasing humidity, promoting vegetation recovery. In desert areas, they can act as windbreaks. Wind farms can result in soil and vegetation disturbances, bird collisions and mortality, and habitat fragmentation, all of which affect species migration and regional ecosystem services. Despite these potential issues, current research remains insufficient in assessing ecological impact systematically.

Prospects We recommend research focusing on three particular areas: (1) Improving and unifying survey methods for accessing ecological impacts on centralized PVs and wind farms; (2) Adopting advanced ecological survey techniques; and (3) Strengthening systematic studies on ecological impacts at the species and ecosystem levels. Moving forward, it is necessary to study the ecological impacts of PVs and wind farms in depth. Biodiversity assessments should be implemented at the early stages of energy planning, and corresponding mitigation strategies should be adopted.

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Cited: CSCD(2)
  
The application and outlook of wildlife tracking using sensor-based tags in China
Binyue Lu, Kun Li, Chenxi Wang, Sheng Li
Biodiv Sci    2024, 32 (5): 23497.   DOI: 10.17520/biods.2023497
Accepted: 28 March 2024

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Aims: The tagging, positioning, and tracking of animals are crucial approaches to the study of their spatial movements. In China, the application of sensor-based wildlife tracking technologies for free-ranging animals has gained significant traction since the 1980s. These technologies have been widely employed in studies related to wildlife behavior and ecology. To provide a comprehensive overview of the current status of wildlife tracking technologies in China and offer insights into the future, we conducted this review based on comprehensive literature research.

Methods: We systematically searched academic articles on wildlife tracking studies conducted in China from 1970 to 2022. We compiled information of each study, including the type of sensor and tracking technologies used, the taxonomic group of tracked animals, the research field, and the location of study sites.

Results: We collected 519 relevant articles published between 1970 and 2022, encompassing 185 species belonging to 7 classes and 32 orders. The study sites encompassed 34 provinces (including municipalities, autonomous regions, and special administrative regions) in China. We identified four hotspots of tracking studies within the country: the eastern edge of the Qinghai-Tibet Plateau and surrounding mountainous areas, the middle and lower reaches of the Yangtze River, the coastal areas from East to South China, and the Northeast China region. Five senor-based tracking technologies were identified in these studies: radio telemetry (RT) (accounting for 47.7% of the total researches), radio frequency identification (RFID) (3.2%), light-level global geolocator sensor (GLS) (0.6%), satellite tracking based on the Argos Satellite System (ASS) (9.3%) or Global Navigation Satellite System (GNSS) (39.3%). Among these technologies, VHF radio telemetry has had a longer history and more applications in China; ASS and GNSS technologies have been introduced late but have undergone rapid growth, with GNSS emerging as the most widely applied technology in the past 5 years. Radio telemetry is predominantly employed for large- and medium-sized mammals, small mammals, terrestrial birds, amphibians and reptiles. GNSS technology is mainly applied in tracking swimming and wading birds. ASS technology is primarily used in fish studies, while RFID technology is prevalent in tracking invertebrate. The choice of technology varies across different research fields, with GNSS and ASS satellite tracking being the primary technology used in migration studies.

Conclusions: The application scale of sensor-based wildlife tracking technologies in China is experiencing rapid expansion, resulting in a rapid increase of numbers of tagged animals and accumulated data. In the future, wildlife tracking studies in China should put emphases on: (1) deepening the research to examine the underlying ecological mechanisms and broadening the research scales, (2) facilitating interdisciplinary collaboration and fostering technological innovation, (3) advocating for and promoting data sharing and fostering multilateral cooperation, and (4) continuing to advance the development and improvement of domestic tracking equipment and technologies. This will provide reliable scientific supports for wildlife ecology research and resource conservation and management in China.

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Analyses and suggestions on mechanisms of forestry and grassland administrations in China to achieve targets of Kunming-Montreal Global Biodiversity Framework
Zhou Zhihua, Jin Xiaohua, Luo Ying, Li Diqiang, Yue Jianbing, Liu Fang, He Tuo, Li Xi, Dong Hui, Luo Peng
Biodiv Sci    2025, 33 (3): 24487.   DOI: 10.17520/biods.2024487
Accepted: 06 March 2025

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Aims: There are 23 targets of Kunming-Montreal Global Biodiversity Framework (KMGBF) from the period up to 2030. China is among the mega biodiversity countries with largest human population and faces a lot of challenges on biodiversity conservation. It is very important to understand current biodiversity conservation status and gaps in order to achieve 2030 mission and 2050 vision. In addition, although forestry and grassland administrations in China (FGAC) are considered as the main body of China biodiversity conservation, especially on in situ conservation, ex situ conservation and trade control, there is no detail analysis about the lawful basis and implementation mechanisms of FGAC for the 23 targets. At the same time, there are many national strategic actions or plans on biodiversity conservation, it is very urgent to propose comments and suggestions on these actions or plans in order to make best usage of limited conservation resources. Here we aim to illustrate current biodiversity conservation status and gaps, lawful basis of FGAC’s duties, and propose our suggestions on Chinese biodiversity conservation on 2030 targets.
Methods: We analyzed the lawful basis and implementation mechanisms of FGAC for the 23 targets of KMGBF, from the aspects of ecosystem conservation, species conservation, genetic resources conservation and biosafety, support measures, and fairness requirements. We analyzed the typical route of implementing framework conventions through synergy among governmental sectors, and discussed four stages, i.e. to determine the whole goals, to identify detail targets, to implement relevant actions or plans, enforcement/supervision/evaluation. We also summarized the biodiversity conservation achievements and shortcomings of FGAC, and provided suggestions for future work.
Results: Our analyses indicated that Chinese government attached high importance on biodiversity conservation. The mandate duties of FGAC well consist with 2030 mission. Many national strategic actions or plans on biodiversity were compiled and implemented by FGAC. Many special conservation measures of FGAC, such as ecological conservation compensation and Forestry-Leader Mechanism, had been established and received huge amount support. The conservation networks have been well established and improving across China. The system of in situ conservation, such as national parks, nature reserves, key habitats of wildlife, has been established and improving across all kinds ecosystem and received strong support from governments, local communities and non-governmental organizations (NGOs). The system of ex situ conservation, such as national botanical gardens, endangered species conservation and research centers, had been well designed and received strong support from national/provincial/municipal governments and scientists. Bilateral and multilateral international co-operations had launched many achievements and contributed to global biodiversity conservation. Public awareness is improved through wide spread communication. Many endangered species have been well protected and the quality of ecosystems is improved onwards. Inner problems related to biodiversity conservation are analyzed. Suggestions are provided regarding in situ conservation, ex situ conservation, enforcement/supervision/ evaluation, and mainstreaming of biodiversity.
Conclusion: Biodiversity conservation has achieved great outcome and is becoming important part of Chinese government. However, there is high pressure for FGAC to implement relevant conservation actions or plans. We propose to improve biodiversity conservation networks, establish biodiversity monitoring system, enhance enforcement, supervision and evaluation, and mainstream biodiversity concept into Chinese culture.

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Cited: CSCD(1)
  
Review of diversity and nitrogen fixation potential of bryophyte-cyanobacteria associations
Jiaojiao Wu, Guanting Guo, Dong Chen, Xin Zhao, Mingzhong Long, Dengfu Wang, Xiaona Li
Biodiv Sci    2023, 31 (8): 23081.   DOI: 10.17520/biods.2023081
Accepted: 05 September 2023

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Background & Aim: As a significant nitrogen source in many natural terrestrial ecosystems where nitrogen is limited, associations formed by bryophytes and nitrogen-fixing cyanobacteria play an essential role in the global nitrogen cycle. Species composition and habitat of bryophyte-cyanobacteria associations result in contrasting nitrogen fixation capacities in different ecosystems. However, the current studies on bryophyte-cyanobacteria associations are predominately conducted in high-latitude ecosystems of the Northern Hemisphere, with few and scattered reports in other ecosystems. Therefore, we summarized the distribution, species composition, cyanobacterial colonization rate, cyanobacterial abundance, and nitrogen fixation potential of reported bryophyte-cyanobacteria associations worldwide, aiming to provide a reference for further study on the diversity and nitrogen fixation capacity of bryophyte- cyanobacteria associations in various ecosystems globally.
Progress: According to our analysis and summarization, a total of 110 bryophyte species from 58 genera in 41 families and more than 26 cyanobacteria species from 17 genera in 9 families, were identified to be involved in bryophyte-cyanobacteria symbiotic associations. The associated bryophyte species varied among diverse ecosystems. For example, Pleurozium schreberi-cyanobacteria associations are dominate in the understory of boreal forests, while Sphagnum spp.-cyanobacteria associations dominate wetland ecosystems. Nostoc species are the dominant cyanobacteria in most ecosystems due to their unique physiological characteristics and strong ecological adaptability. Among different ecosystems the colonization rate, abundance, and nitrogen fixation capacity of cyanobacteria on bryophytes differed significantly. Nitrogen fixation was highest in Arctic tundra ecosystems (1.3-24.6 kg N·ha-1·yr-1), followed by boreal forests (0.04-11.53 kg N·ha-1·yr-1), and was the lowest in temperate grasslands (0.008-0.124 kg N·ha-1·yr-1).
Perspective: We emphasized that the research on species composition and the capacity for nitrogen fixation was quite inadequate. We also highlighted four research perspectives: (1) Employing techniques such as metagenomics and establishing observation and research stations to explore and study the colonization characteristics and nitrogen fixation ability of cyanobacteria associated with bryophytes. (2) Conducting further and systematic research on bryophyte-cyanobacteria associations in all types of ecosystems. (3) Unifying the measurement and estimation methods of nitrogen fixation rate in different ecosystems. (4) Determining the key influencing factors and regulatory pathways of the diversity, distribution, colonization rate, cyanobacteria abundance, and nitrogen fixation rate of bryophyte- cyanobacteria associations.

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Research progress of diet composition and its research methods for Père David’s deer
Haolin Wang, Huaisheng Zhang, Jianqiang Zhu, Zhongyi Chen, Yulin Ke, Tao Yang, Hui Chen
Biodiv Sci    2024, 32 (1): 23057.   DOI: 10.17520/biods.2023057
Accepted: 29 November 2023

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Background & Aim: Milu (Père David’s deer, Elaphurus davidianus) is a national key protected wild animal. Since its reintroduction in 1980, research on the diet composition of Milu has been a focus of researchers. We summarized the main feeding plants of Milu in the Beijing Milu Ecological Research Center, the Dafeng Milu National Nature Reserve, and the Shishou Milu National Nature Reserve. And we reviewed the common research methods of diet composition for animal including direct observation, utilization method, stomach content analysis, fecal microanalysis, stomach content or fecal DNA analysis and stable isotope technology and compared in terms of temporal scale, diet resolution, diet from the consumed stage, major strengths and major limitations. And, we analyzed the effects of ecological factors such as self-factors, plant nutrients and availability, and human activities on the diet composition of Milu. The analysis of the diet composition of Milu and common diet composition research methods aims to clarify the current progress of Milu diet composition research for promoting ex-situ conservation and natural return of Milu.

Review results: The main food source of Milu is plants. The food selection of Milu is influenced not only by self-factors, but also by the nutrient content and availability of feeding plants and anthropogenic factor. Physiological variation and alteration of energy requirements due to self-factors can influence the diet composition of the deer. Plant nutrients including crude protein, soluble sugars, and fiber are important factors influencing diet composition. Plant availability and anthropogenic factors further influence diet composition by changing food diversity and abundance. The comparative analysis of common diet composition research methods shows that different methods reflect different time scales and food resolutions in resolving diet composition, and there are corresponding advantages and limitations in the face of large endangered ungulates such as Milu.

Perspectives: We recommend that researchers should clarify the purpose and target population of the study. On this basis, researchers should reasonably assess the strengths and limitations of the available research methods, select appropriate sampling and data analysis methods to establish a reasonable diet composition research program. In future studies on the food composition of Milu, should focus on integrating the results of related studies on Milu, using a combination of methods to analyze diet composition, and comprehensively analyzing the food selection mechanism of Milu. This will not only guide the response of Milu to habitat fragmentation, wetland degradation and anthropogenic disturbance during reintroduction, but also further promote the development of Père David’s population and long-term conservation efforts.

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Biogeographic patterns in Southeast Asia: Retrospectives and perspectives
Honghu Meng, Yigang Song
Biodiv Sci    2023, 31 (12): 23261.   DOI: 10.17520/biods.2023261
Accepted: 08 December 2023

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Background & Aims: The regions of Southeast Asia are recognized as global biodiversity hotspots that require conservation priority. Since the mid-19th century, Southeast Asia has been widely considered as one of the most important foundations of biogeography. This recognition stems from the groundbreaking field works of Alfred Russel Wallace, who spent eight years to extensively explore the regions and proposed the geographic distribution patterns of fauna in Malesia (or the Malay Archipelago). Wallace’s works in Southeast Asia, such as the famous “Wallace Line” and its distinct distribution patterns, established the region as a crucial cradle and frontier of biogeography. Also, such renowned works have garnered significant attention from numerous biogeographers and ecologists. Additionally, the unique geomorphology and abundant biodiversity in Southeast Asia have sparked a growing scientific interest, leading to an increasing number of studies that explored the biodiversity and geographic distribution patterns in the regions. The comprehension of geographic distribution patterns of biodiversity in Southeast Asia can enhance our understanding of the origination, evolution, and response of global biodiversity to environmental and climatic changes.

Progress: In this review, we have undertaken a comprehensive synthesis of the primary biogeographic investigation conducted in Southeast Asia, spanning from the era of Alfred Russel Wallace to the present day. The main biogeographic studies in Southeast Asia are retrospectively reviewed and the existing problems are considered here.

Conclusion: Several key findings of biogeography in Southeast Asia with the most important distribution patterns are listed as follows. Firstly, Southeast Asia, based on the boundary or delimitation, encompasses the Indochina Peninsula and Malesia, which consist of four distinct bioregions: Indochina, Sundaic, Philippines and Wallacea. Secondly, the biogeographic patterns with these regions, as well as the biogeographic relationships or patterns among regions are primarily influenced by the mechanism of vicariance, migration and dispersal. Thirdly, the difference in biogeographic boundaries, particularly along the Wallace Line, can be attributed to variations in the migration and dispersal capacity of plants and animals. Lastly, the biogeographic connections between Southeast Asia and Sahul are mainly driven by the exchanges of flora and fauna, with elements from both regions have been migrated to and from each other. This review presents some ideas and offers recommendations to address the unresolved challenges of the field of biogeography in Southeast Asia. In all, we hope this review serves as a link between past and future, intends to throw out a minnow to catch a whale, and facilitates the flourishing development of biogeography in Southeast Asia.

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Cited: CSCD(2)
  
Research progress on ecological functions and community assembly of plant microbiomes
Qing Zeng, Chao Xiong, Mei Yin, Anhui Ge, Lili Han, Limei Zhang
Biodiv Sci    2023, 31 (4): 22667.   DOI: 10.17520/biods.2022667
Accepted: 10 March 2023

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Background & Aim: Plants harbor large and highly diverse microbial communities in every compartment niche, including the surfaces and interiors of all plant organs. These microorganisms, namely plant microbiomes, have co-evolved with host plant for over hundreds of millions of years and play important roles in plant nutrient uptake, growth promotion, disease resistance and adaptation to environmental stresses as “holobionts” of the host plant. The rapid development of multi-omics approaches in recent decades has greatly promoted the research on diversity, composition, functions and driver factors of plant microbiomes and plant-microbiome interaction mechanisms. However, the current understanding and utilization of the plant microbiome remain inadequate in comparison to soil microbiome.

Progresses: This review summarized the recent progresses on the diversity, composition, functions and mechanisms of plant microbiomes in regulating plant growth and development, promoting nutrient uptake, improving disease resistance and adaption to environmental stresses. We further reviewed the driving factors of plant microbiome community assembly, from the respective of host selection, environmental factors and microbial interactions. The complex plant-microbe interactions that shape plant microbiome community and regulate their beneficial functions for plants were highlighted.

Perspectives: We prospect that more research efforts will be put towards core microbiome mining, synthetic community construction and application, precise screening of plant genetic loci affecting beneficial microbe colonization, and unraveling plant-microbiome interaction mechanisms at the plant-microbial community level. Overall, a comprehensive understanding of plant microbial community assembly and ecological functions and the mechanisms is vital for future management and manipulation of plant microbiomes for ecosystem health and agricultural sustainability.

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Cited: CSCD(3)
  
Development status and document analysis: A review on terrestrial vertebrate field surveys in China
Zhenghao Wu, Zhifeng Ding, Zhixin Zhou, Jianchao Liang, Zhuoting Wang, Yaning Zhang, Yiming Hu, Huijian Hu
Biodiv Sci    2023, 31 (3): 22363.   DOI: 10.17520/biods.2022363
Accepted: 20 March 2023

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Aim: To understand the history and contemporary status of terrestrial vertebrate diversity surveys in China by analyzing the existing problems and suggesting the corresponding solutions.

Method: We searched publications on terrestrial vertebrate field surveys from CNKI Database, Web of Science Core Collection Database and Duxiu Scholar Database with “mammals” “avian” “birds” “reptilians” “amphibians” “survey” “monitor” “new species” “new records” “animal resources” and “species diversity” as keywords. We reviewed the surveys on the terrestrial vertebrates since 1949 in China. We analyzed and compared the distribution of surveys among provinces and biodiversity hotspots, as well as the survey methods and techniques used.

Review Results: Compared with the surveys of mammals, amphibians and reptiles in China, surveys of birds appeared most (70.26% of all publications considered). The terrestrial vertebrate field surveys in Sichuan Province (285 publications) and Yunnan Province (260 publications) were more extensive in coverage than those in other regions. The number of surveys was different in the four biodiversity hotspots. The Indo-Burma hotspot (348 publications) and “Mountains of Southwest China” (324 publications) had more publications, and “Mountains of Central Asia” (71 publications) and “Himalaya” (66 publications) had fewer publications. The common methods on terrestrial vertebrate diversity surveys were: the line transect method, the point sampling method, the quadrat sampling method and the direct count method. The line transect method was the most frequently used in all the application scenarios (e.g., alpine tundra, farmland, city, etc.). Observation, capture, and camera traps were the most widely used sampling techniques. The observation sampling technique was the most frequently used in all application scenarios (e.g., city, wetland, grassland, etc.). At present, terrestrial vertebrate field surveys have made a lot of progress, including the development of new species data collection methods and identification techniques (e.g. unmanned aerial vehicle (UAV) technology in the search of large mammals and mixed-waterbirds, satellite tracking technology in the search of migratory birds, etc.), and the improvement of survey methods and data management in the era of “big data”, among others.

Going Forward: In the future, we should broaden the application of new species data collection methods and identification techniques, and explore new techniques for terrestrial vertebrate surveys. Furthermore, we should improve the population data analysis and the survey management system based on “big data” which is prevalent. Lastly, in addition to developing biodiversity protection measures, the results of terrestrial vertebrate surveys should be oriented to the public, and in doing this, the general public shall gain interest in biodiversity protection.

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Cited: CSCD(1)
  
List of the wild woody plants in Henan Province
Xiaoning Zeng, Penghang Wang, Mengfan Zhang, Jing Su, Zhiyuan Shi, Fuling Gao, Jiamei Li
Biodiv Sci    2023, 31 (6): 22306.   DOI: 10.17520/biods.2022306
Accepted: 11 November 2022

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Aims: Henan Province is located in the central part of China. Its complex and diverse geographical environment play an important role in the region’s rich plant diversity. A large number of plant specimens collected by predecessors have provided strong support for the publication of Flora of Henan. However, the Flora of Henan (Supplement and Revision) lacked a great deal of field investigation and omitted some previously published new records. We have updated the catalog to clarify the wild woody plant resources in Henan Province.

Methods: Based on a review of published literature, including all specimens from Henan Province preserved in all the herbariums in China, and continuous field survey of all mountains in Henan Province during the past 5 years, this paper updates the checklist of wild woody plants in Henan Province, China. In this new checklist, the delimitation and arrangement of plant families followed new systems primarily based on molecular phylogenetics.

Results: According to the revision of Flora of China, we recorded a total of 984 species with 32 subspecies, 148 varieties and 11 forms of wild woody plants in this checklist. This included synonyms of 5 genera, 102 species, 21 subspecies and 24 varieties from Flora of China, together with 6 genera, 194 species, 20 subspecies, 35 varieties and 1 form from Flora of Henan. 168 new records and 50 problematical taxa of wild woody plants from Flora of Henan were also listed in this checklist.

Conclusion: Our results show that continuous field survey of plant diversity is still important in the Shangcheng, Xinxian, Tongbai, Xichuan, Lushi, and Lingbao in provincial boundary counties in Henan Province.

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Biodiversity credits: Concepts, principles, transactions and challenges
Yunyue Peng, Tong Jin, Xiaoquan Zhang
Biodiv Sci    2024, 32 (2): 23300.   DOI: 10.17520/biods.2023300
Accepted: 11 January 2024

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Aim & Background Unlike biodiversity offsets, which are based on the premise of biodiversity loss, biodiversity credits are an economic instrument that is measurable, traceable, tradable, and generates net biodiversity gains. To address the funding gap for biodiversity and to halt and reverse global biodiversity loss, biodiversity credits have emerged with carbon credits as a blueprint.

Results This paper introduced the conceptual framework of biodiversity credits, providing a detailed explanation of their similarities and differences with biodiversity offsets and carbon credits. Drawing on the foundation of high-quality carbon credits, the paper summarized the principles of biodiversity credits, including their accounting approaches and governance systems. Furthermore, it presented the current global market for biodiversity credits, offering specific practical examples of various trading projects.

Prospects The paper also examined four aspects of problems and challenges related to biodiversity credits: (1) pricing in voluntary markets lacks clear standards; (2) the risk of being a potential greenwashing tool used by enterprises; (3) regulatory and governance systems need safeguards for transparency and community rights; (4) the compatibility with carbon credits is controversial. Looking forward, challenges and opportunities of biodiversity credits co-exist as a critical tool for businesses to achieve their Environmental, Social and Governance (ESG) goals.

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Food source characteristics and diversity of birds based on feeding behavior in residential areas of Beijing
Luqin Yin, Cheng Wang, Wenjing Han
Biodiv Sci    2023, 31 (5): 22473.   DOI: 10.17520/biods.2022473
Accepted: 01 January 2023

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Aims: Urban areas can provide important habitats for birds. Residential green spaces can play an important role in urban green spaces and may provide valuable resources for urban birds. Food diversity and quantity can be one of the factors that could be limiting bird survival. Therefore, by considering the food preferences of birds, this study aims to determine the relationship between birds and their food sources in Beijing residential areas. Furthermore, this study seeks to determine what factors may influence bird feeding behavior in residential areas.
Methods: Forty residential areas were selected as survey plots and surveyed monthly from June 2020 to May 2021. Shannon-Wiener diversity index was used for evaluating bird diversity, and the distribution was defined as the numbers of residential areas where birds fed. A generalized linear model was used to evaluate the influencing factors of bird feeding in residential areas, and linear regression was performed on the diversity index, abundance and the distribution of bird feeding sources.
Results: (1) The feeding behavior of 2,242 birds (35 species, 14 families) were recorded. We observed that bird richness was at its highest in spring, followed by autumn, winter and summer, then abundance was at its highest in spring, followed by winter, autumn and summer, and the Shannon-Wiener diversity index was at its highest in autumn, followed by spring, winter, summer. (2) A decrease in food sources was observed in the following: insects (33.87%), samara (18.33%), berries (9.77%), cones (8.16%) and grass seeds (5.17%). (3) The direct utilization of plants by birds was 60.4%, while the indirect utilization was 39.6%. The Shannon-Wiener diversity index of food source plants decreased in autumn (3.1612), winter (2.9651), spring (2.9203) and summer (2.1763). (4) The species of food source was the most critical environmental factor that determined birds feeding behavior in residential areas. Birds with more abundant food sources had larger populations and wider distribution ranges.
Conclusion: Plant species in residential areas can be highly diverse and can offer a wide range of food sources for multiple species of birds throughout their entire phenology between the early spring and autumn. It is necessary to plant more native tree species and fruiting plants, reduce hedgerows, and advocate near-natural management measures with low disturbance.

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Cited: CSCD(1)
  
Application of environmental RNA technology in aquatic biological monitoring
Miao Li, Chenyang Yao, Xiaoyong Chen
Biodiv Sci    2023, 31 (5): 23062.   DOI: 10.17520/biods.2023062
Accepted: 03 May 2023

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Background & Aims: Biological monitoring is a core component of biodiversity conservation, and an important tool for assessing the progress of conservation efforts. Traditional aquatic monitoring methods are often based on specimen collection and morphological identification, which are time-consuming and ineffective practices. Additionally, these methods are unable to conduct the type of large-scale, continuous ecological surveys that are required for many conservation initiatives. There is therefore an urgent need to find a new approach to monitoring to meet today’s growing biodiversity surveillance needs.
Progresses & Challenges: As molecular biology tools have improved, environmental RNA technology has been introduced into the field of aquatic biomonitoring and applied to species monitoring, biodiversity assessment, and pathogen detection, showing significant potential to meet conservation needs. However, the development of environmental RNA technology is still at the proof-of-concept stage, and there are many technical drawbacks, including limited understanding of environmental RNA ecological processes, the inconsistent application of the technology and, the lack of a transcriptome database that limits its ability to be used in aquatic biomonitoring.
Review Results: In this review, we first give a brief introduction to environmental RNA technology. We then introduce the analysis process of environmental RNA technology and discuss in detail what information should be noted in the sample collection and preservation process, the environmental RNA extraction and cDNA synthesis process, PCR amplification and sequencing, and analysis of results. Next, we present the current status of the application of environmental RNA technology in three areas: species monitoring, biodiversity assessment, and pathogen detection. Further, we also discuss problems associated with environmental RNA technology in practical applications. Finally, we summarize the strengths and weaknesses of environmental RNA technology. We identify two primary advantages of environmental RNA technology: (1) environmental RNA technology can further improve the accuracy of biomonitoring; and (2) environmental RNA technology can reveal additional relevant information, such as the structural composition of populations, the physiological status of organisms, and the health of ecosystems. The shortcomings of environmental RNA technology are as follows: (1) the ecological processes of eRNAs released into the environment are unclear, which may lead to false positive and false negative errors; (2) the application of environmental RNA technology is not standardized, which makes it impossible to compare the results between different studies; and (3) the lack of a transcriptome database will limit the further development of environmental RNA technology in aquatic biomonitoring. In order to make full use of environmental RNA technology, these shortcomings must be addressed as soon as possible.
Going Forward: In the future, in order to properly apply environmental RNA technology in the field of aquatic biomonitoring, researchers should focus on the following aspects in their research: (1) to clarify the ecological processes of environmental RNA in the aquatic environment to reduce the probability of false positive and false negative errors; (2) to develop a standardized analysis process for environmental RNA technology so that the data obtained from aquatic biomonitoring using these approaches are accurate, reproducible and comparable; (3) to continuously improve the transcriptome database so that environmental RNA technology can be used for more biological assessments; and (4) to further expand the application of environmental RNA technology in aquatic biomonitoring, such as the use of environmental RNA technology to conduct research on the physiological conditions of aquatic organisms, population ecology and ecosystem health evaluation.

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Investigation of the diversity of mammals and birds and the activity rhythm of dominant species using camera trapping in a fragmented forest in the Dujiangyan region, Sichuan Province
Kunming Zhao, Shengbin Chen, Xifu Yang
Biodiv Sci    2023, 31 (6): 22529.   DOI: 10.17520/biods.2022529
Accepted: 16 June 2023

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Aims: The impacts of habitat fragmentation on biodiversity are a critical research area in ecology and conservation biology. However, there is still insufficient understanding of how habitat fragmentation affects species diversity and activity rhythm. The purpose of this study is to investigate the diversity of birds and animals in fragmented forests and to explore the effects of patch size and stand age on the diversity of mammals and birds, as well as the daily activity rhythm of dominant species.

Methods: From July 2018 to July 2021, researchers used infrared cameras to survey mammal and bird species in 21 fragmented forest patches located in the Dujiangyan region of Sichuan Province. The “vegan” package in R was used to generate the species accumulation curve; the linear mixed model of the “lme4” package in R was used to analyze the relationship between species richness and relative abundance index, and factors such as patch sizes, stand ages, and seasonal variations; the “overlap” package and “activity” package in R were used to analyze the daily activity rhythm and niche overlap of two dominant species and anthropogenic activities, through kernel density estimation and coefficient of overlap analyses.

Results: This study documented a total of 63 species of wild animals, which belonged to 10 orders and 25 families. These species included 52 species of birds and 11 species of mammals. Notably, 12 of the recorded species are Class-II national protected animals, such as Macaca thibetana, Prionailurus bengalensis, Chrysolophus pictus, and Tragopan temminckii; 7 species are endemic to China, including M. thibetana, Muntiacus reevesi, and Bambusicola thoracicus; 1 species (Arctonyx collaris) is red listed by the IUCN as Vulnerable (VU), and two species (M. thibetana and Elaphodus cephalophus) are listed as Near Threatened (NT). The research found that the species richness and relative abundance index of mammals increased as patch sizes increased. However, there was no significant correlation between bird species richness and relative abundance index, and patch sizes. Stand ages did not have significant correlations with the relative abundance index of mammals and birds. Furthermore, the study showed that the bird species richness and relative abundance index were significantly higher in the dry season than in the wet season. In contrast, the relative abundance index of mammals was significantly lower in the dry season than in the wet season, while mammal species richness did not significantly differ between the dry and wet season. The daily activity rhythm curves of the two dominant species (i.e., C. pictus and B. thoracicus) were highly overlapping and showed no significant niche differentiation; the overlap of daily activity rhythm increased as patch size but decreased with stand ages. In addition, the diurnal activity of the two dominant bird species showed a noticeable avoidance of anthropogenic activities during certain times.

Conclusion: Our findings indicate that forest fragmentation mainly affects mammal diversity and the daily activity rhythm of dominant birds. Therefore, it is crucial to enhance the use of new technologies such as infrared cameras to monitor, study and protect the diversity of wildlife in areas outside protected zones and national parks. Our results provide valuable insights for further studies on the impact of habitat fragmentation on biodiversity and species coexistence.

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Cited: CSCD(2)
  
The status and distribution pattern of fish diversity in the Yarlung Tsangpo River
Dekui He, Jinnan Chen, Liuyong Ding, Yiyang Xu, Junhao Huang, Xiaoyun Sui
Biodiv Sci    2024, 32 (11): 24143.   DOI: 10.17520/biods.2024143
Accepted: 11 August 2024

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Aims: The Yarlung Tsangpo River, one of the ten longest rivers in China, spans two major zoogeographic regions of the world: The Palearctic and the Oriental realms. While previous papers have focused on small portions of the river, a basin-wide-scale study to catalog its fish composition, diversity patterns, and species fluctuation is lacking. This study synthesized empirical data from field studies over the past two decades on fish diversity in the Yarlung Tsangpo River, compiled a list of fish diversity in the Yarlung Tsangpo River Basin in China, and analyzed the status of the fish diversity and the main threats to its diversity. The findings provide a scientific foundation for management and conservation of fish diversity in the Yarlung Tsangpo River Basin.

Methods: In total, 66 sections were included in this study. Of them, 58 were actually surveyed in the field, and 8 were collected from literatures; two in the upper reaches, 40 in the middle reaches, and 24 in the lower reaches; 24 in the main stream, 33 in the tributaries, 2 in the lakes, 3 in the tributary reservoirs, and 4 wetlands. These sampling sections (locations) were selected according to their geomorphological characteristics, as well as the accessibility of each location for sampling. The fish investgations were conducted from 2004 to 2023. Methods for collecting fishes included gillnets, shrimp coops, and battery-powered backpack electrofisher. After compiling the data from all of the sites, the degree of endemicity was calculated using the corrected weighted endemism index.

Results: There are 155 native species in 10 orders, 25 families, and 70 genera in the Yarlung Tsangpo River Basin. Out of all of the detected species, 29 species and one genus are endemic to the river. Five species were on China’s Key Protected Species List (Grade II); and 26 species were categorised as threatened (i.e. endangered, vulnerable, or near threatened) on the IUCN Red List of Threatened Species and China’s Biodiversity Red List. The sections with high species richness are located in the middle and lower reaches of the Yarlung Tsangpo River, while the lowest species richness is found in the Great Canyon sections. Fish fauna of the river is dominated by Qinghai-Tibetan Plateau, and South Asian fishes. The Jiaresa-Bangxin section of the Yarlung Tsangpo River Grand Canyon may be the boundary between the two major zoogeographical regions of freshwater fish. By the end of 2023, 30 species of non-native fish in 8 orders, 16 families, and 24 genera had been recorded in the natural water bodies of the Yarlung Tsangpo River Basin. Of these non-native fish species, three species were introduced to different regions within the Yarlung Tsangpo River Basin. In recent years, there has been a rapid increase in the introduction of both native fishes and non-native cold-adapted fishes through the plateau’s drainage systems.

Conclusion: Through cataloging the fish diversity in the Yarlung Tsangpo River Basin, we found that invasion of non-native fishes is the main threat to fish diversity. In the future, we should focus on fish surveys of lakes and tributaries in the lower reaches of the river, strengthen the resources for data integration, and establish a basin-level data management platform. Further, taxonomic research should be strengthened through international cooperation. Additionally, long-term monitoring of fish resources should be implemented as soon as possible to monitor fish diversity and promote conservation in the Yarlung Tsangpo River.

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Status, threats and conservation suggestions on seagrass beds in Guangdong
Chao Zhong, Yaqin Liao, Weijie Liu, Haozhi Sui, Qinghua Chen
Biodiv Sci    2024, 32 (2): 23201.   DOI: 10.17520/biods.2023201
Accepted: 21 November 2023

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Background & Aims Seagrass beds rank among the earth’s most valuable ecosystems, providing extensive ecosystem services to human. Despite their global significance, seagrass beds in the world, particularly in China, face threats from human activities, leading to their degradation. While recent studies in Guangdong Province have increasingly elucidated the distribution characteristics of seagrass beds and threats from multiple sources, a systematic summary of these findings remains limited. Given the anticipated continued pressure of high intensity human activities in the future period of time along the Guangdong coast, a deeper understanding of the challenges faced by seagrass beds in crucial from formulating targeted conservation suggestions aimed at effectively preserving their biodiversity.

Review results In this work, we comprehensively reviewed research results on Guangdong seagrass beds since the 21st century and summarized the information on their distribution of seagrass beds. Through a combination of field investigations and domestic and international research, we identified to Guangdong seagrass beds. The results showed that seagrass was widely distributed along the Guangdong coast, covering an area of 1,540 ha and comprising five species. Halophila ovalis and H. beccarii were both dominant species, while Zostera japonica, Halodule uninervis, Ruppia brevipedunculata had more limited distribution. This paper illustrated the impact of both human and natural factors on growth and distribution of seagrass, and pointed out that human activities such as mariculture, fishing, land-based pollution, marine engineering as primary threats. Moreover, the study acknowledged the significance of species invasion and global climate change.

Perspectives Aiming at threats mentioned above, we proposed conservation suggestions that building upon established protection measures. These recommendations include strengthening scientific research on seagrass bed ecosystem, improving the ability of survey and surveillance on seagrass, establishing a regulatory system for protecting seagrass, managing and controlling pollutant emissions, reinforcing ecological restoration of seagrass beds, and launching popular science activities and awareness campaigns.

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Pollination difference between Apis cerana cerana and Apis mellifera ligustica during the late autumn and winter
Fan Wu, Shenyun Liu, Huqiang Jiang, Qian Wang, Kaiwei Chen, Hongliang Li
Biodiv Sci    2023, 31 (5): 22528.   DOI: 10.17520/biods.2022528
Accepted: 21 March 2023

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Aims: The pollination behaviors of Apis cerana cerana (Acc) and Apis mellifera ligustica (Aml) have a significant meaning in maintaining ecosystem stability and improving crop yield and quality. However, their pollination behaviors are different. The aim of this study is to analyze the differences of pollinating habit and plant diversity between the two species under low temperature during the late autumn and winter periods.
Methods: We observed the pollination process of Acc and Aml, and collected the pollen in Xiasha Higher Education Campus of Hangzhou City during the late autumn and winter periods. The pollen morphology was analyzed by ordinary and scanning electron microscope, and further determined based on the gene ribulose 1,5-bisphosphate carboxylase (rbcl) amplified and DNA barcode. Finally, the diversity of pollinating plants was compared according to the pollen species during the late autumn and winter.
Results: Both Acc and Aml can pollinate the local plants during the late autumn and winter periods, but Acc had better adaptability and pollination frequency in the morning from 8:30 to 9:30 (P < 0.05). For different plants, Acc and Aml can pollinate many kinds of plant. Acc tended to collect pollen of Humulus scandens, Rosa chinensis, Eriobotrya laoshanica, and Hedera nepalensis var. sinensis, while Aml was partial to collect pollen of Ternstroemia gymnanthera, Chrysanthemum boreale, and Zinnia baageana.
Conclusions: In general, Acc and Aml can pollinate many kinds of plant during autumn and winter, and Acc have more extensive plant source. The investigation of pollination diversity and differences between Acc and Aml during the late autumn and winter periods will be helpful to study the pollination rules and preferences of honeybees, and provide theoretical for ecological protection in Hangzhou City.

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Cited: CSCD(1)
  
A dataset on inventory and geographical distributions of wild vascular plants in Hainan Province, China
Caiqun Liang, Yukai Chen, Xiaobo Yang, Kai Zhang, Donghai Li, Yuexin Jiang, Jinghan Li, Chongyang Wang, Shunwei Zhang, Zicheng Zhu
Biodiv Sci    2023, 31 (6): 23067.   DOI: 10.17520/biods.2023067
Accepted: 21 June 2023

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Hainan Province is an area with a large contiguous area of tropical rainforest in China. It is one of the key areas of biodiversity with the largest tropical rainforest area and the most abundant species diversity in China. During 2012-2015, the Inventory of Plant Species Diversity of Hainan, List of Species in Hainan, and Illustrated Handbook of Plants in Hainan were published in succession. The progress of related cataloging is relatively advanced in China. However, with the in-depth study of Hainan plants, the names of some vascular plant taxa originally recorded have changed after new taxonomic revision. The classification of families and genera and their names need to be adjusted. At the same time, the original classification system also need to be updated. Based on the List of Species in Hainan and Illustrated Handbook of Plants in Hainan, combined with experience from many years of practical field investigation, we systematically searched the literature to fill the gaps in the existing catalog data, checking for omissions and deficiencies. The name was revised, the classification system updated, and relevant information such as plant distribution areas and protection levels improved. Finally, the cataloging and distribution dataset of wild vascular plants in Hainan Province was complete. As of February 2023, the dataset had 4,945 records, including 39 species of lychophytes belonging to 6 genera of 2 families; 531 species of ferns belonging to 121 genera of 32 families; 27 species of gymnosperms belonging to 10 genera of 6 families, and 4,348 species of angiosperms belonging to 1,380 genera of 181 families. Among them, there were 173 species listed in the List of National Key Protected Wild Plants (2021) (8 species in the first class and 165 species in the second class); there were 4,769 species of native wild plants belonging to 1,448 genera and 216 families (including 516 endemic species of Hainan) and 176 species of exotic and naturalized plants (including 63 invasive species). Compared with the first edition of the List of Species in Hainan, the total number of wild vascular plants increased by 225 species. This dataset can be used as important basic data for vascular plant diversity monitoring and protection in Hainan Province.

Database/Dataset Profile

Title A dataset on inventory and geographical distributions of wild vascular plants in Hainan Province, China
Author(s) Caiqun Liang, Yukai Chen, Xiaobo Yang, Kai Zhang, Donghai Li, Yuexin Jiang, Jinghan Li, Chongyang Wang, Shunwei Zhang, Zicheng Zhu
Corresponding author Xiaobo Yang (yanfengxb@163.com)
Time range 1994-2022
Geographical scope Hainan Province
Spatial resolution District (county)
File size 759 KB
Data format *.xlsx
Data link https://www.scidb.cn/s/ZBbqy2
https://doi.org/10.57760/sciencedb.09087
https://www.biodiversity-science.net/fileup/1005-0094/DATA/2023067.zip
Database/Dataset composition The dataset consists of 1 data file containing 1 sheet with 4,945 items (rows) and 15 fields (columns) as following: number, main categories of vascular plants, number of family, family name in Chinese, family name, genus name in Chinese, genus name, name in Chinese, scientific name, author, rank in the List of National Key Protected Wild Plants (2021), growth status, the symbol of growth status, distribution and habitat, data sources.
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Research advances on the ecology of Sousa chinensis
Liming Yong, Yuke Zhang, Liyuan Zhao, Qianhui Zeng, Longshan Lin, Minhao Gao, Hao Cheng, Xianyan Wang
Biodiv Sci    2023, 31 (5): 22670.   DOI: 10.17520/biods.2022670
Accepted: 22 March 2023

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Background & Aims: The Indo-Pacific humpback dolphin (Sousa chinensis) has been listed as the Grade 1 National Key Protected Animal in China. As the top predator of the inshore marine food chain, S. chinensis is an indicator species of the health status of the inshore ecosystem. Due to the important ecological, scientific and cultural values, it is also used as the flagship species for marine biodiversity conservation. Since the 1990s, the studies on S. chinensis have gradually risen, and developed to a new period in recent years along with the application of 3S (RS, GPS, GIS), ecological models, and molecular biological techniques. We summarized the studies of S. chinensis from the aspects of population ecology, behavioral ecology, molecular ecology and the threats that the species faced so far, aiming to clarify the advances in the ecological studies and the contributions to conservation of S. chinensis.
Progress: Ecological information such as distribution and abundance of S. chinensis population known globally in the world has been investigated by domestic and foreign scholars using line-transect sampling and capture-mark-recapture methods. In the context of species conservation, studies on habitat selection preference, habitat quality evaluation and potential habitat prediction of S. chinensis were performed. The rules of foraging behavior and reproduction behavior of S. chinensis were preliminarily understood, and the ecological significance of other behaviors were also explored. With the application of molecular biotechnology, the genetic differentiation of S. chinensis and its vulnerability to climate change have been preliminarily revealed. Human activities such as marine construction projects, underwater noise, marine pollution, and fishery activities are still the main threats to S. chinensis.
Perspectives: Based on the summary of existing studies, we propose the following prospects for the future ecological research and conservation of S. chinensis: (1) Establish a dynamic baseline database at the national level to better track the population dynamics and habitat environment changes of S. chinensis. (2) Establish a habitat identification and conservation evaluation system, and carry out identification and hierarchical management of critical and potential habitats of S. chinensis. (3) Study the habitat selection mechanism from the ecosystem level, combined with the ecological model to explore the carrying capacity of the current habitat to the S. chinensis, and further explore the impact of habitat hydrological factors, biological resources and human activities on the habitat selection of S. chinensis. (4) Construct a genetic resource database for S. chinensis, and explore the links among natural selection, ecological impact and genetic evolution, so as to reveal the molecular mechanisms of species evolution, adaptation and endangerment. (5) In order to effectively deal with the impact of global marine environmental changes on the S. chinensis, it is recommended to establish a scientific research cooperation platform and protection management network among the S. chinensis distribution countries.

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Cited: CSCD(1)
  
Species diversity of intertidal crabs (Decapoda: Brachyura) of Dongzhaigang National Nature Reserve, Hainan Province
Erhui Feng, Weinuo Liang, Liang Hu, Xu Zhang
Biodiv Sci    2023, 31 (9): 23030.   DOI: 10.17520/biods.2023030
Accepted: 25 May 2023

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Aim: Brachyuran crabs are one of the important representatives of large benthic invertebrates in intertidal habitats and also an important component of mangrove wetland ecosystem. Dongzhaigang National Nature Reserve (DZGNNR) in Hainan preserves the most typical mangrove wetland ecosystem in China. It is also one of the key areas in the marine biogeographic division of East Asia. However, limited knowledge on intertidal crab species richness and unclear fauna characteristics in this area. Based on a comprehensive field survey combined with previous studies, we have cataloged an updated checklist of intertidal crabs of DZGNNR.

Method: The field survey was conducted in the intertidal zone of DZGNNR between September and November of 2022. During this time, 16 sampling sites were investigated and a total of 207 specimens were collected and identified. The species recorded in previous documents were reassessed and each taxon was revised according to the recent researches.

Results: During the field survey, we collected a total of 64 species of brachyuran crabs from 17 families and 39 genera. Out of these, 22 species were previously undocumented in DZGNNR, and two species were newly discovered in Hainan Province (Elamena rostrata and Parasesarma ungulatum). The updated checklist of brachyuran fauna of DZGNNR now includes 115 species belonging to 22 families and 63 genera.

Conclusions The intertidal brachyuran fauna of DZGNNR is mainly composed of East Asian warm water species, with Indo-West Pacific warm water elements being the most prevalent. This indicates that the DZGNNR is part of the northern South China Sea Subtropical Provinces in terms of its zoobenthic fauna, similar to the intertidal brachyuran fauna found in Guangxi, Guangdong and Fujian. Our study provides new insights on the brachyuran fauna of DZGNNR and north Hainan Island, which improve our understanding of zoobenthic biogeographical patterns in northern South China Sea.

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Cited: CSCD(5)
  
Plant species classification of coastal wetlands based on UAV images and object- oriented deep learning
Yufei Huang, Chunyan Lu, Mingming Jia, Zili Wang, Yue Su, Yanlin Su
Biodiv Sci    2023, 31 (3): 22411.   DOI: 10.17520/biods.2022411
Accepted: 22 February 2023

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Aims: Under the influence of high intensity human activities, e.g. urban expansion, offshore pollutant discharge and marine resources over-exploitation, various ecological problems have been caused in recent years, especially plant species decrease, productivity decline and ecological function degradation in coastal wetland. In this context, a quick and accurate understanding of types and distribution of plant species is of great significance to coastal wetland biodiversity conservation and ecological sustainable development. Due to cloud cover in coastal zones, it is difficult to obtain effective data by using optical satellite remote-sensed images. However, unmanned aerial vehicle (UAV) remote sensing technology can overcome weather constraints and provide intelligent and flexible data acquisition for a feasible technique for plant species monitoring in coastal zones. Compared with pixel-based classification methods, object- oriented classification method can effectively avoid the salt-pepper phenomenon with better classification performance. However, only the low-level features are applied to the object-oriented classification method. Because of this, it is difficult to improve the classification accuracy for complex regions with many plant species. High-level classification features are used by a deep learning method to identify land cover types to achieve higher classification accuracy. In this study, combing UAV remote sensing technology and object-oriented deep learning method, plant species information of coastal wetlands was identified and classified.

Methods: A representative coastal wetland area, located in Minjiang River estuary of South China, was chosen as the research site. High-resolution visible-light images of Minjiang River estuary wetland were obtained by UAV, and field sampling sites were collected by GPS. By the correction, splicing, and clipping of the UAV images, the digital orthophoto map and digital surface model were obtained. Then, on the basis of object-oriented multiresolution segmentation, the optimal segmentation scale of UAV images was determined by the scale parameter estimation model. The optimal feature combination was selected from spectral, texture, shape and height features based on separability analysis. The U-net deep learning method was used to extract the plant species information of coastal wetlands, and its classification accuracy was compared with four machine learning methods: K-nearest neighbor (KNN), decision tree (DT), random forest (RF) and Bayes.

Results: Combing object-oriented method and the U-net classification method, the classification results had the better integrity with less mixing and misclassification than other classification. The object-oriented U-net method could effectively avoid the salt-pepper phenomenon with overall accuracy (OA) 95.67% and the Kappa coefficient 0.91. The OA and Kappa coefficient of each classification were in descending order: U-net > Bayes > RF > DT > KNN. There were significant differences between the producer accuracy and user accuracy of a single plant species in different classification methods. Kandelia candel, Phragmites australis and Ipomoea pescaprae had higher identification accuracy, while Scirpus mariqueter and Cyperus malaccensis had lower identification accuracy.

Conclusion: The object-oriented U-net deep learning method has a favorable classification performance, and its accuracy is significantly higher than other methods in our study. The selection of optimal feature combination is the key to improving the extraction efficiency of coastal wetland plant species information. Our study could provide references for fine classification of coastal wetland plant species, as well as monitoring and biodiversity conservation management of coastal wetlands.

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