戴云山国家级自然保护区访花昆虫DNA条形码数据集

doi:10.17520/biods.2023236

摘要/Abstract

摘要：

访花和传粉昆虫对于维持生态系统功能具有重要作用, 但我国相关昆虫类群的本底数据非常缺乏。作为基于特定基因序列的物种划分方法, DNA条形码在标本鉴定、新物种发现、生物多样性保护、种群遗传和进化等研究领域具有重要的应用价值。本文报道了福建戴云山国家级自然保护区双翅目、膜翅目和鞘翅目3个类群访花昆虫的815条线粒体COI条形码数据, 并详细提供了所获样品的海拔分布信息。该数据集可为地区性昆虫多样性的DNA条形码数据库构建、隐存种发现、海拔梯度物种遗传多样性和生物多样性保护等方面研究提供帮助。

数据库(集)基本信息简介

数据库(集)名称	戴云山国家级自然保护区不同海拔访花昆虫的DNA条形码数据集
作者	罗小燕, 李强, 黄晓磊
通讯作者	黄晓磊(huangxl@fafu.edu.cn)
时间范围	2021年
地理区域	福建泉州市德化县, 25°38'-25°43' N, 118°05′-118°20′ E
文件大小	107.63 KB
数据量	815条条形码序列; 815条样品记录
数据格式	.fasta, .xlsx
数据链接	http://www.dataopen.info/article/298 http://doi.org/10.24899/do.202307003 https://www.biodiversity-science.net/fileup/1005-0094/DATA/2023236.zip
数据库(集)组成	数据集共包括1个序列数据文件, 1个样品信息文件

https://www.biodiversity-science.net/fileup/1005-0094/DATA/2023236.zip

关键词: 戴云山, 海拔梯度, 马氏网陷阱, DNA条形码

Abstract

Flower-visiting and pollinating insects play vital roles in maintaining ecosystem functions, but the biodiversity data of these insect groups has been grossly inadequate in China. As a species identification method based on specific gene sequences, DNA barcoding has important application value in specimen identification, discovery of new species, biodiversity conservation, population genetics and evolutionary research. In this study, a total of 815 mitochondrial COI barcodes of flower-visiting insects from Diptera, Lepidoptera and Coleoptera in Daiyun Mountain National Nature Reserve were sequenced and analyzed. The distributions of the insect samples at different elevation were also provided in detail. This dataset can help in constructing regional insect DNA barcode databases, discovering cryptic species, studying altitudinal genetic diversity and biodiversity conservation.

Database/Dataset Profile

Title	DNA barcode reference dataset for flower-visiting insects in Daiyun Mountain National Nature Reserve
Author(s)	Xiaoyan Luo, Qiang Li, Xiaolei Huang
Corresponding author	Xiaolei Huang (huangxl@fafu.edu.cn)
Time range	2021
Geographical scope	Dehua County (Fujian), 25°38'-25°43' N, 118°05′-118°20′E
File size	107.63 KB
Data format	.fasta, .xlsx
Data link	http://www.dataopen.info/article/298 http://doi.org/10.24899/do.202307003 https://www.biodiversity-science.net/fileup/1005-0094/DATA/2023236.zip
Database/Dataset composition	The dataset includes a total of 1 sequence data file and 1 sample information file.

Key words: Daiyun Mountain, elevational gradient, Malaise trap, DNA barcode

罗小燕, 李强, 黄晓磊 (2023) 戴云山国家级自然保护区访花昆虫DNA条形码数据集. 生物多样性, 31, 23236. DOI: 10.17520/biods.2023236.

Xiaoyan Luo, Qiang Li, Xiaolei Huang (2023) DNA barcode reference dataset for flower-visiting insects in Daiyun Mountain National Nature Reserve. Biodiversity Science, 31, 23236. DOI: 10.17520/biods.2023236.

导出引用管理器 EndNote|Ris|BibTeX

链接本文: https://www.biodiversity-science.net/CN/10.17520/biods.2023236

https://www.biodiversity-science.net/CN/Y2023/V31/I8/23236

图/表 4

图1 福建戴云山8个昆虫监测样地示意图

Fig. 1 The location of eight insect monitoring plots in Daiyun Mountain of Fujian

图2 分子分类单元(a)和条形码序列(b)数量在各海拔带的占比情况

Fig. 2 Proportions of numbers of molecular operational taxonomic units (a) and barcode sequences (b) across different elevational bands

图3 不同海拔带的物种分布。集合图可分为上(柱状图)、下(左侧的条形图、中间的海拔和右侧的点阵图)两个部分。点阵图中单个点代表该分组的特有物种, 连接的点代表与其他分组的共有物种, 上部分柱状图用于展示不同组之间共有或独有的物种数量, 下部分左侧的条形图代表不同海拔上的物种数量情况。

Fig. 3 Species distribution at different elevational bands. The UpSet plot can be divided into the upper (histogram) and the bottom (the bar chart on the left, the elevation in the middle, and the dot plot on the right) parts. In the dot plot, a single point represents the endemic species of a particular group, while connected points represent shared species with other groups. The upper bar chart is used to show the number of shared or unique species among different groups. The bottom left bar chat shows the number of species in different elevations.

图4 本研究DNA条形码序列的BLAST比对情况

Fig. 4 The statistics of BLAST alignment results for DNA barcodes obtained in this study

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