生物多样性

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生物多样性评估挑战的层级占有率模型解决路径

吴春莹1#, Viorel D. Popescu2#, 季吟秋1*   

  1. 1. 中国科学院昆明动物研究所遗传进化与动物模型全国重点实验室 & 云南省高黎贡山生物多样性重点实验室, 昆明 650201; 2. Department of Ecology, Evolution and Environmental Biology, Columbia University, New York, NY 10027, USA
  • 收稿日期:2025-10-01 修回日期:2026-01-20 接受日期:2026-01-28
  • 通讯作者: 季吟秋
  • 基金资助:
    国家重点研发计划(2022YFC2602504)

Hierarchical occupancy models as solutions to challenges in biodiversity assessment

Chunying Wu1#, Viorel D. Popescu2#, Yinqiu Ji1*   

  1. 1 State Key Laboratory of Genetic Resources and Evolution & Yunnan Key Laboratory of Biodiversity and Ecological Conservation of Gaoligong Mountain, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China 

    2 Department of Ecology, Evolution and Environmental Biology, Columbia University, New York, NY 10027, USA

  • Received:2025-10-01 Revised:2026-01-20 Accepted:2026-01-28
  • Contact: Yinqiu Ji

摘要: 面对全球第六次生物大灭绝的严峻形势, 准确评估物种分布和种群动态已成为生物多样性监测中的紧迫任务。传统生物多样性监测方法常因生物学固有的不完全检测问题而导致估计偏差, 为生物多样性保护带来挑战。本文深入阐释层级占有率模型(hierarchical occupancy models, HOM)如何通过分离生态过程(占有率ψ)与观测过程(检测率p)的双层统计框架, 实现对不完全检测的无偏校正。重点论述该模型在整合多源异构数据、捕捉种群动态(定殖率γ与灭绝率ε)和同时分析多物种关联性方面的独特应用优势。其产出的真实占有率、动态参数及相关衍生指标, 是支持系统保护规划(systematic conservation planning, SCP)的高效、可理解且可审计的决策工具。本文同时剖析了模型应用中的关键挑战及应对策略, 以期为生态学研究者提供方法论参考, 并为管理者与决策者将模型输出转化为保护行动提供分析路径与依据。

关键词: 层级占有率模型, 生物多样性监测, 不完全检测, 种群动态, 系统保护规划, 多源数据整合

Abstract

Background: Amid the accelerating global biodiversity crisis driven by human activities, precise monitoring and assessment of species distributions and population dynamics have become urgent priorities for conservation. Traditional survey methods often suffer from imperfect detection, leading to biased estimates of occupancy and hindering effective management decisions. The advent of big data offers opportunities for integrating diverse sources, yet challenges in handling heterogeneity and observational biases persist. Hierarchical occupancy models, by explicitly separating ecological processes (true occupancy) from observation processes (detection probability), provide a robust statistical framework to obtain unbiased inferences and have emerged as a powerful tool in biodiversity monitoring. 

Main Content: This paper reviews the theoretical foundations of hierarchical occupancy models, including the classic single-season framework and key extensions such as multi-season (dynamic) models for quantifying colonization, extinction, and temporal trends, as well as multispecies (community) models that harness interspecific correlations to enhance inferential precision. We highlight their core advantages: correcting for false negatives through explicit detection probability estimation, flexibly integrating heterogeneous multi-source data, and generating interpretable, auditable ecological indicators for biodiversity assessment. However, practical applications face several challenges, including data quality and heterogeneity issues, violations of key assumptions (e.g., independence of observations, population closure within seasons, absence of false positives), potential constraints on the biological interpretability of parameters, high computational demands for complex models and large datasets, and difficulties in communicating results to non-specialists and policymakers. Corresponding mitigation strategies are discussed, such as standardized data preprocessing, rigorous assumption validation, interdisciplinary collaboration, algorithmic optimization, and enhanced science-policy translation. 

Conclusion: Hierarchical occupancy models significantly advance the scientific rigor and reliability of biodiversity monitoring and evaluation by addressing imperfect detection and enabling integrative analyses. Moving forward, continued methodological innovations, fusion with emerging data types and technologies, deeper cross-disciplinary integration, and efforts toward standardization and broader application will further strengthen their role in supporting evidence-based conservation in the face of ongoing global change.

Key words: hierarchical occupancy model, biodiversity monitoring, imperfect detection, population dynamics, systematic conservation planning, multi-source data integration