生物多样性 ›› 2017, Vol. 25 ›› Issue (6): 565-576. DOI: 10.17520/biods.2017041
所属专题: 物种形成与系统进化
收稿日期:
2017-02-16
接受日期:
2017-04-25
出版日期:
2017-06-20
发布日期:
2017-07-10
通讯作者:
王玉国
基金资助:
Received:
2017-02-16
Accepted:
2017-04-25
Online:
2017-06-20
Published:
2017-07-10
Contact:
Wang Yuguo
摘要:
在生物进化过程中, 自然杂交对物种形成有着重要的影响。多倍化和同倍体杂交物种形成是通过杂交产生新种的两种主要方式。普遍的观点认为多倍化是植物物种形成的主要动力, 而越来越多染色体倍性相同物种之间杂交现象的发现, 说明同倍体杂交也是物种形成的重要方式。目前按严格标准确定的同倍体物种形成案例相对较少, 还亟需对更多不同类型的种间杂交带进行形态与分子等多方面证据的调研, 并通过模型预测与实测数据分析, 来探讨杂交物种形成初期乃至整个过程的遗传基础; 更多杂交物种形成的新模式材料, 有待于通过分化谱系的历史基因流重建进行鉴定, 用于进一步阐释自然选择对于生殖隔离形成的影响、物种形成过程中的生态适应变化和多样性遗传创新的产生规律。本文简要综述了自然杂交的研究历史, 阐述其相关概念、研究方法和基因组时代杂交与物种形成研究的最近进展, 并针对拟解决的关键问题提出相应的分析见解, 以期为后续研究和涉及杂交的物种多样性保护提供借鉴。
王玉国 (2017) 自然杂交与物种形成. 生物多样性, 25, 565-576. DOI: 10.17520/biods.2017041.
Yuguo Wang (2017) Natural hybridization and speciation. Biodiversity Science, 25, 565-576. DOI: 10.17520/biods.2017041.
[107] | Stebbins GL Jr (1947) Types of polyploids: their classification and significance. Advances in Genetics, 1, 403-429. |
[108] | Stebbins GL Jr (1985) Polyploidy, hybridization, and the invasion of new habitats. Annals of the Missouri Botanical Garden, 72, 824-832. |
[109] | Stölting KN, Nipper R, Lindtke D, Caseys C, Waeber S, Castiglione S, Lexer C (2013) Genomic scan for single nucleotide polymorphisms reveals patterns of divergence and gene flow between ecologically divergent species. Molecular Ecology, 22, 842-855. |
[110] | Streicher JW, Devitt TJ, Goldberg CS, Malone JH, Blackmon H, Fujita MK (2014) Diversification and asymmetrical gene flow across time and space: lineage sorting and hybridization in polytypic barking frogs. Molecular Ecology, 23, 3273-3291. |
[111] | Vriesendorp B, Bakker FT (2005) Reconstructing patterns of reticulate evolution in angiosperms: what can we do? Taxon, 54, 593-604. |
[112] | Wagner WH Jr (1970) Biosystematics and evolutionary noise. Taxon, 19, 146-151. |
[113] | Wall JD, Yang MA, Jay F, Kim SK, Durand EY, Stevison LS, Gignoux C, Woerner A, Hammer MF, Slatkin M (2013) Higher levels of Neanderthal ancestry in East Asians than in Europeans. Genetics, 194, 199-209. |
[114] | Wang L, Luzynski K, Pool JE, Janoušek V, Dufková P, Vyskočilová MM, Teeter KC, Nachman MW, Munclinger P, Macholán M, Piálek J, Tucker PK (2011) Measures of linkage disequilibrium among neighbouring SNPs indicate asymmetries across the house mouse hybrid zone. Molecular Ecology, 20, 2985-3000. |
[115] | Wang XR, Szmidt AE, Savolainen O (2001) Genetic composition and diploid hybrid speciation of a high mountain pine, Pinus densata, native to the Tibetan Plateau. Genetics, 159, 337-346. |
[116] | Wendel JF, Doyle JJ (1998) Phylogenetic incongruence: window into genome history and molecular evolution. In: Molecular Systematics of Plants. II. DNA Sequencing (eds Soltis DE, Soltis PS, Doyle JJ), pp. 265-296. Kluwer Academic Publishers, Boston/Dordrecht/London. |
[1] | Abbott RJ (1992) Plant invasions, interspecific hybridization and the evolution of new plant taxa. Trends in Ecology and Evolution, 7, 401-405. |
[2] | Abbott RJ (2003) Sex, sunflowers, and speciation. Science, 301, 1189-1190. |
[3] | Anderson E (1949) Introgressive Hybridization. John Wiley & sons, New York. |
[4] | Anderson E, Hubricht L (1938) Hybridization in Tradescantia. III. The evidence for introgressive hybridization. American Journal of Botany, 25, 396-402. |
[5] | Anderson E, Stebbins GL Jr (1954) Hybridization as an evolutionary stimulus. Evolution, 8, 378-388. |
[6] | Andrew RL, Rieseberg LH (2013) Divergence is focused on few genomic regions early in speciation: incipient speciation of sunflower ecotypes. Evolution, 67, 2468-2482. |
[7] | Andrew RL, Kane NC, Baute GJ, Grassa CJ, Rieseberg LH (2013) Recent nonhybrid origin of sunflower ecotypes in a novel habitat. Molecular Ecology, 22, 799-813. |
[8] | Arnold ML (1992) Natural hybridization as an evolutionary process. Annual Review of Ecology and Systematics, 85, 1893-1896. |
[9] | Arnold ML (1993) Iris nelsonii: origin and genetic composition of a homoploid hybrid species. American Journal of Botany, 80, 577-583. |
[10] | Arnold ML (1997) Natural Hybridization and Evolution. Oxford University Press, Oxford. |
[11] | Arnold ML, Bennett BD, Zimmer EA (1990a) Natural hybridization between Iris fulva and I. hexagona: patterns of ribosomal DNA variation. Evolution, 44, 1512-1521. |
[12] | Arnold ML, Hamrick JL, Bennett BD (1990b) Allozyme variation in Louisiana irises: a test for introgression and hybrid speciation. Heredity, 65, 297-306. |
[13] | Arnold ML, Buckner CM, Robinson JJ (1991) Pollen mediated introgression and hybrid speciation in Louisiana irises. Proceedings of the National Academy of Sciences, USA, 188, 1398-1402. |
[14] | Barb JG, Bowers JE, Renaut S, Rey JI, Knapp SJ, Rieseberg LH, Burke JM (2014) Chromosomal evolution and patterns of introgression in Helianthus. Genetics, 197, 969-979. |
[15] | Baumel A, Ainouche ML, Bayer RJ, Misset MT (2002) Molecular phylogeny of hybridizing species from genus Spartina Schreb. (Poaceae). Molecular Phylogenetics and Evolution, 22, 303-314. |
[16] | Baumel A, Ainouche ML, Misset MT, Gourret JP, Bayer RJ (2003) Genetic evidence for hybridization between the native Spartina maritima and the introduced Spartina alterniflora (Poaceae) in South-West France: Spartina × neyrautii re-examined. Plant Systematics and Evolution, 237, 87-97. |
[17] | Bohling JH (2016) Strategies to address the conservation threats posed by hybridization and genetic introgression. Biological Conservation, 203, 321-327. |
[18] | Buerkle CA, Morris RJ, Asmussen MA, Rieseberg LH (2000) The likelihood of homoploid hybrid speciation. Heredity, 84, 441-451. |
[19] | Burri R, Nater A, Kawakami T, Mugal CF, Olason PI, Smeds L, Suh A, Dutoit L, Bureš S, Garamszegi LZ, Hogner S, Moreno J, Qvarnström A, Ružić M, Sæther SA, Sætre GP, Török J, Ellegren H (2015) Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum of Ficedula flycatchers. Genome Research, 25, 1656-1665. |
[20] | Carneiro M, Albert FW, Afonso S, Pereira RJ, Burbano H, Campos R, Melo-Ferreira J, Blanco-Aguiar JA, Villafuerte R, Nachman MW, Good JM, Ferrand N (2014) The genomic architecture of population divergence between subspecies of the European rabbit. PLoS Genetics, 10, e1003519. |
[21] | Chat J, Jauregui B, Petit RJ, Nadot S (2004) Reticulate evolution in kiwifruit (Actinidia, Actinidiaceae) identified by comparing their maternal and paternal phylogenies. American Journal of Botany, 91, 736-747. |
[22] | Clausen J, Keck DD, Hiesey WM (1945) Experimental studies on the nature of species. II. Plant evolution through amphiploidy and autoploidy, with examples from the Madiinae. Carnegie Institution of Washington Publication, 564, 1-163. |
[23] | Cui L, Wall PK, Leebens-Mack JH, Lindsay BG, Soltis DE, Doyle JJ, Soltis PS, Carlson JE, Arumuganathan K, Barakat A, Albert VA, Ma H, dePamphilis CW (2006) Widespread genome duplications throughout the history of flowering plants. Genome Research, 16, 738-749. |
[24] | Dejaco T, Gassner M, Arthofer W, Schlick-Steiner BC, Steiner FM (2016) Taxonomist’s nightmare … evolutionist’s delight: an integrative approach resolves species limits in jumping Bristletails despite widespread hybridization and parthenogenesis. Systematic Biology, 65, 947-974. |
[25] | Duenez-Guzman EA, Mavarez J, Vose MD, Gavrilets S (2009) Case studies and mathematical models of ecological speciation. 4. Hybrid speciation in butterflies in a jungle. Evolution, 63, 2611-2626. |
[26] | Eaton DAR, Ree RH (2013) Inferring phylogeny and introgression using RADseq data: an example from flowering plants (Pedicularis: Orobanchaceae). Systematic Biology, 62, 689-706. |
[27] | Elder JR, Turner BJ (1995) Concerted evolution of repetitive DNA sequences in eukaryotes. Quarterly Review of Biology, 70, 297-319. |
[28] | Ellegren H, Smeds L, Burri R, Olason PI, Backström N, Kawakami T, Künstner A, Mäkinen H, Nadachowska-Brzyska K, Qvarnström A, Uebbing S, Wolf JB (2012) The genomic landscape of species divergence in Ficedula flycatchers. Nature, 491, 756-760. |
[29] | Ellstrand NC, Whitkus R, Rieseberg LH (1996) Distribution of spontaneous plant hybrid. Proceedings of the National Academy of Sciences, USA, 93, 5090-5093. |
[30] | Ellstrand NC, Schierenbeck KA (2000) Hybridization as a stimulus for the evolution of invasiveness in plant? Proceedings of the National Academy of Sciences, USA, 97, 7043-7050. |
[31] | Feliner GN, Álvarez I, Fuertes-Aguilar J, Heuertz M, Marques I, Moharrek F, Piñeiro R, Riina R, Rosselló JA, Soltis PS, Villa-Machío I (2017) Is homoploid hybrid speciation that rare? An empiricist’s view. Heredity, 118, 513-516. |
[32] | Ferguson D, Sang T (2001) Speciation through homoploid hybridization between allotetraploids in peonies (Paeonia). Proceedings of the National Academy of Sciences, USA, 98, 3915-3919. |
[33] | Fontaine MC, Pease JB, Steele A, Waterhouse RM, Neafsey DE, Sharakhov IV, Jiang X, Hall AB, Catteruccia F, Kakani E, Mitchell SN, Wu YC, Smith HA, Love RR, Lawniczak MK, Slotman MA, Emrich SJ, Hahn MW, Besansky NJ (2015) Extensive introgression in a malaria vector species complex revealed by phylogenomics. Science, 347, 1258524. |
[34] | Garrigan D, Kingan SB, Geneva AJ, Andolfatto P, Clark AG, Thornton KR, Presgraves DC (2012) Genome sequencing reveals complex speciation in the Drosophila simulans clade. Genome Research, 22, 1499-1511. |
[35] | Geraldes A, Farzaneh N, Grassa CJ, McKown AD, Guy RD, Mansfield SD, Douglas CJ, Cronk QC (2014) Landscape genomics of Populus trichocarpa: the role of hybridization, limited gene flow, and natural selection in shaping patterns of population structure. Evolution, 68, 3260-3280. |
[36] | Gompert Z, Lucas LK, Nice CC, Fordyce JA, Forister ML, Buerkle CA (2012) Genomic regions with a history of divergent selection affect fitness of hybrids between two butterfly species. Evolution, 66, 2167-2181. |
[37] | Good JM, Vanderpool D, Keeble S, Bi K (2015) Negligible nuclear introgression despite complete mitochondrial capture between two species of chipmunks. Evolution, 69, 1961-1972. |
[38] | Grant V (1981) Plant Speciation. Columbia University Press, New York. |
[39] | Green RE, Krause J, Briggs AW, Maricic T, Stenzel U, Kircher M, Patterson N, Li H, Zhai W, Fritz MH, Hansen NF, Durand EY, Malaspinas AS, Jensen JD, Marques-Bonet T, Alkan C, Prüfer K, Meyer M, Burbano HA, Good JM, Schultz R, Aximu-Petri A, Butthof A, Höber B, Höffner B, Siegemund M, Weihmann A, Nusbaum C, Lander ES, Russ C, Novod N, Affourtit J, Egholm M, Verna C, Rudan P, Brajkovic D, Kucan Z, Gusic I, Doronichev VB, Golovanova LV, Lalueza-Fox C, de la Rasilla M, Fortea J, Rosas A, Schmitz RW, Johnson PL, Eichler EE, Falush D, Birney E, Mullikin JC, Slatkin M, Nielsen R, Kelso J, Lachmann M, Reich D, Pääbo S (2010) A draft sequence of the Neandertal genome. Science, 328, 710-722. |
[40] | Heliconius Genome Consortium (2012) Butterfly genome reveals promiscuous exchange of mimicry adaptations among species. Nature, 487, 94-98. |
[41] | Hermansen JS, Haas F, Trier CN, Bailey RI, Nederbragt AJ, Marzal A, Sætre GP (2014) Hybrid speciation through sorting of parental incompatibilities in Italian sparrows. Molecular Ecology, 23, 5831-5842. |
[42] | Hovick SM, Whitney KD (2014) Hybridisation is associated with increased fecundity and size in invasive taxa: meta-analytic support for the hybridisation-invasion hypothesis. Ecology Letters, 17, 1464-1477. |
[43] | Isoda K, Shirasi S, Watanabe S, Kitamura K (2000) Molecular evidence of natural hybridization between Abies veitchii and A. homolepis (Pinaceae) revealed by chloroplast, mitochondrial and nuclear DNA markers. Molecular Ecology, 9, 1965-1974. |
[44] | Jackiw RN, Mandil G, Hager HA (2015) A framework to guide the conservation of species hybrids based on ethical and ecological considerations. Conservation Biology, 29, 1040-1051. |
[45] | Janoušek V, Wang L, Luzynski K, Dufková P, Vyskočilová MM, Nachman MW, Munclinger P, Macholán M, Piálek J, Tucker PK (2012) Genome-wide architecture of reproductive isolation in a naturally occurring hybrid zone between Mus musculus musculus and M. m. domesticus. Molecular Ecology, 21, 3032-3047. |
[46] | Janoušek V, Munclinger P, Wang L, Teeter KC, Tucker PK (2015) Functional organization of the genome may shape the species boundary in the house mouse. Molecular Biology and Evolution, 32, 1208-1220. |
[47] | Jiao Y, Wickett NJ, Ayyampalayam S, Chanderbali AS, Landherr L, Ralph PE, Tomsho LP, Hu Y, Liang H, Soltis PS, Soltis DE, Clifton SW, Schlarbaum SE, Schuster SC, Ma H, Leebens-Mack J, dePamphilis CW (2011) Ancestral polyploidy in seed plants and angiosperms. Nature, 473, 97-100. |
[48] | Jónsson H, Schubert M, Seguin-Orlando A, Ginolhac A, Petersen L, Fumagalli M, Albrechtsen A, Petersen B, Korneliussen TS, Vilstrup JT, Lear T, Myka JL, Lundquist J, Miller DC, Alfarhan AH, Alquraishi SA, Al-Rasheid KA, Stagegaard J, Strauss G, Bertelsen MF, Sicheritz-Ponten T, Antczak DF, Bailey E, Nielsen R, Willerslev E, Orlando L (2014) Speciation with gene flow in equids despite extensive chromosomal plasticity. Proceedings of the National Academy of Sciences, USA, 111, 18655-18660. |
[49] | Keller I, Wagner CE, Greuter L, Mwaiko S, Selz OM, Sivasundar A, Wittwer S, Seehausen O (2013) Population genomic signatures of divergent adaptation, gene flow and hybrid speciation in the rapid radiation of Lake Victoria cichlid fishes. Molecular Ecology, 22, 2848-2863. |
[50] | Kim MB, Lockhart PJ (2006) Reconstructing reticulate evolutionary histories of plants. Trends in Plant Science, 11, 398-404. |
[51] | Kim ST, Sultan SE, Donoghue MJ (2008) Allopolyploid speciation in Persicaria (Polygonaceae): insights from a low- copy nuclear region. Proceedings of the National Academy of Sciences, USA, 105, 12370-12375. |
[52] | Lamichhaney S, Berglund J, Almén MS, Maqbool K, Grabherr M, Martinez-Barrio A, Promerová M, Rubin CJ, Wang C, Zamani N, Grant BR, Grant PR, Webster MT, Andersson L (2015) Evolution of Darwin’s finches and their beaks revealed by genome sequencing. Nature, 518, 371-375. |
[53] | Lee JF, Mummenhoff K, Bowman JL (2002) Allopolyploidization and evolution of species with reduced floral structures in Lepidium L. (Brassicaceae). Proceedings of the National Academy of Sciences, USA, 99, 16835-16840. |
[54] | Lewontin RC, Birch LC (1966) Hybridization as a source of variation for adaptation to new environments. Evolution, 20, 315-336. |
[55] | Liu KJ, Steinberg E, Yozzo A, Song Y, Kohn MH, Nakhleh L (2015) Interspecific introgressive origin of genomic diversity in the house mouse. Proceedings of the National Academy of Sciences, USA, 112, 196-201. |
[56] | Lohse K, Clarke M, Ritchie MG, Etges WJ (2015) Genome-wide tests for introgression between cactophilic Drosophila implicate a role of inversions during speciation. Evolution, 69, 1178-1190. |
[57] | Lohse K, Frantz LA (2014) Neandertal admixture in Eurasis confirmed by maximum-likelihood analysis of three genomes. Genetics, 196, 1241-1251. |
[58] | Lotsy JP (1916) Evolution by Means of Hybridization. Martinus Nijhoff, The Hague. |
[59] | Lowry DB, Gould BA (2016) Speciation continuum. In: Encyclopedia of Evolutionary Biology (ed. Kliman R), pp. 159-165. Academic Press, Oxford, UK. |
[60] | Mallet J (2005) Hybridization as an invasion of the genome. Trends in Ecology and Evolution, 20, 229-237. |
[61] | Mallet J (2007) Hybrid speciation. Nature, 446, 279-283. |
[62] | Marcussen T, Sandve SR, Heier L, Spannagl M, Pfeifer M, International Wheat Genome Sequencing Consortium, Jakobsen KS, Wulff BB, Steuernagel B, Mayer KF, Olsen OA (2014) Ancient hybridizations among the ancestral genomes of bread wheat. Science, 345, 1250092. |
[117] | Wendel JF, Schnabel A, Seelanan T (1995) An unusual ribosomal DNA sequence from Gossypium gossypioides reveals ancient, cryptic, intergenomic introgression. Molecular Phylogenetics and Evolution, 4, 298-313. |
[118] | Wood TE, Takebayashi N, Barker MS, Mayrose I, Greenspoon PB, Rieseberg LH (2009) The frequency of polyploid speciation in vascular plants. Proceedings of the National Academy of Sciences, USA, 106, 13875-13879. |
[63] | Martin SH, Dasmahapatra KK, Nadeau NJ, Salazar C, Walters JR, Simpson F, Blaxter M, Manica A, Mallet J, Jiggins CD (2013) Genome-wide evidence for speciation with gene flow in Heliconius butterflies. Genome Research, 23, 1817-1828. |
[64] | Martin CH, Cutler JS, Friel JP, Dening Touokong C, Coop G, Wainwright PC (2015) Complex histories of repeated gene flow in Cameroon crater lake cichlids cast doubt on one of the clearest examples of sympatric speciation. Evolution, 69, 1406-1422. |
[65] | Masterson J (1994) Stomatal size in fossil plants: evidence for polyploidy in majority of angiosperms. Science, 264, 421-424. |
[66] | Mavárez J, Salazar CA, Bermingham E, Salcedo C, Jiggins CD, Linares M (2006) Speciation by hybridization in Heliconius butterflies. Nature, 441, 868-871. |
[67] | Mayr E (1992) A local flora and the biological species concept. American Journal of Botany, 79, 222-238. |
[68] | McCarthy EM, Asmussen MA, Anderson WW (1995) A theoretical assessment of recombinational speciation. Heredity, 74, 502-509. |
[69] | Meier JI, Marques DA, Mwaiko S, Wagner CE, Excoffier L, Seehausen O (2017) Ancient hybridization fuels rapid cichilid fish adaptive radiations. Nature Communications, 8, 14363. |
[70] | Melo MC, Salazar C, Jiggins CD, Linares M (2009) Assortative mating preferences among hybrids offers a route to hybrid speciation. Evolution, 63, 1660-1665. |
[71] | Mesgaran MB, Lewis MA, Ades PK, Donohue K, Ohadi S, Li C, Cousens RD (2016) Hybridization can facilitate species invasions, even without enhancing local adaptation. Proceedings of the National Academy of Sciences, USA, 113, 10210-10214. |
[72] | Mogensen HL (1996) The hows and whys of cytoplasmic inheritance. American Journal of Botany, 83, 383-404. |
[73] | Morin PA, Archer FI, Foote AD, Vilstrup J, Allen EE, Wade P, Durban J, Parsons K, Pitman R, Li L, Bouffard P, Abel Nielsen SC, Rasmussen M, Willerslev E, Gilbert MT, Harkins T (2010) Complete mitochondrial genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species. Genome Research, 20, 908-916. |
[74] | Nadachowska-Brzyska K, Burri R, Olason PI, Kawakami T, Smeds L, Ellegren H (2013) Demographic divergence history of pied flycatcher and collared flycatcher inferred from whole-genome re-sequencing data. PLoS Genetics, 9, e1003942. |
[75] | Nadeau NJ, Martin SH, Kozak KM, Salazar C, Dasmahapatra KK, Davey JW, Baxter SW, Blaxter ML, Mallet J, Jiggins CD (2013) Genome-wide patterns of divergence and gene flow across a butterfly radiation. Molecular Ecology, 22, 814-826. |
[76] | Nolte AW, Tautz D (2010) Understanding the onset of hybrid speciation. Trends in Genetics, 26, 54-58. |
[77] | O’Loughlin SM, Magesa S, Mbogo C, Mosha F, Midega J, Lomas S, Burt A (2014) Genomic analyses of three malaria vectors reveals extensive shared polymorphism but contrasting population histories. Molecular Biology and Evolution, 31, 889-902. |
[78] | Otto SP, Whitton J (2000) Polyploid incidence and evolution. Annual Review of Genomics, 34, 401-437. |
[79] | Parchman TL, Gompert Z, Braun MJ, Brumfield RT, McDonald DB, Uy JA, Zhang G, Jarvis ED, Schlinger BA, Buerkle CA (2013) The genomic consequences of adaptive divergence and reproductive isolation between species of manakins. Molecular Ecology, 22, 3304-3317. |
[80] | Payseur BA, Rieseberg LH (2016) A genomic perspective on hybridization and speciation. Molecular Ecology, 25, 2337-2360. |
[81] | Phifer-Rixey M, Bomhoff M, Nachman MW (2014) Genome-wide patterns of differentiation among house mouse subspecies. Genetics, 198, 283-297. |
[82] | Poelstra JW, Vijay N, Bossu CM, Lantz H, Ryll B, Müller I, Baglione V, Unneberg P, Wikelski M, Grabherr MG, Wolf JBW (2014) The genomic landscape underlying phenotypic integrity in the face of gene flow in crows. Science, 344, 1410-1414. |
[83] | Prüfer K, Racimo F, Patterson N, Jay F, Sankararaman S, Sawyer S, Heinze A, Renaud G, Sudmant PH, de Filippo C, Li H, Mallick S, Dannemann M, Fu Q, Kircher M, Kuhlwilm M, Lachmann M, Meyer M, Ongyerth M, Siebauer M, Theunert C, Tandon A, Moorjani P, Pickrell J, Mullikin JC, Vohr SH, Green RE, Hellmann I, Johnson PL, Blanche H, Cann H, Kitzman JO, Shendure J, Eichler EE, Lein ES, Bakken TE, Golovanova LV, Doronichev VB, Shunkov MV, Derevianko AP, Viola B, Slatkin M, Reich D, Kelso J, Pääbo S (2014) The complete genome sequence of a Neanderthal from the Altai Mountains. Nature, 505, 43-49. |
[84] | Ramsey J, Schemske DW (2002) Neopolyploidy in flowering plants. Annual Review of Ecology and Systematics, 33, 589-639. |
[85] | Renaut S, Grassa CJ, Yeaman S, Moyers BT, Lai Z, Kane NC, Bowers JE, Burke JM, Rieseberg LH (2013) Genomic islands of divergence are not affected by geography of speciation in sunflowers. Nature Communications, 4, 1827. |
[86] | Rheindt FE, Fujita MK, Wilton PR, Edwards SV (2014) Introgression and phenotypic assimilation in Zimmerius flycatchers (Tyrannidae): population genetic and phylogenetic inferences from genome-wide SNPs. Systematic Biology, 63, 134-152. |
[87] | Rieseberg LH (1991) Homoploid reticulate evolution in Helianthus (Asteraceae): evidence from ribosomal genes. American Journal of Botany, 78, 1218-1237. |
[88] | Rieseberg LH, Carney SE (1998) Tansley review No. 102: Plant hybridization. New Phytologist, 140, 599-624. |
[89] | Rieseberg LH, Carter R, Zona S (1990) Molecular tests of the hypothesized hybrid origin of two diploid Helianthus species (Asteraceae). Evolution, 44, 1498-1511. |
[90] | Rieseberg LH, Raymond O, Rosenthal DM, Lai Z, Livingstone K, Nakazato T, Durphy JL, Schwarzbach AE, Donovan LA, Lexer C (2003) Major ecological transitions in wild sunflowers facilitated by hybridization. Science, 301, 1211-1216. |
[91] | Rieseberg LH, Wendel JF (1993) Introgression and its consequences in plants. In: Hybrid Zones and the Evolutionary Process (ed. Harrison RG), pp. 70-109. Oxford University Press, Oxford. |
[92] | Russell A, Samuel R, Klejna V, Barfuss MH, Rupp B, Chase MW (2010) Reticulate evolution in diploid and tetraploid species of Polystachya (Orchidaceae) as shown by plastid DNA sequences and low-copy nuclear genes. Annals of Botany, 106, 37-56. |
[93] | Salazar C, Baxter SW, Pardo-Diaz C, Wu G, Surridge A, Linares M, Bermingham E, Jiggins CD (2010) Genetic evidence for hybrid trait speciation in Heliconius butterflies. PLoS Genetics, 6, 1-12. |
[94] | Sang T, Crawford DJ, Stuessy TF (1995) Documentation of reticulate evolution in peonies (Paeonia) using internal transcribed spacer sequences of nuclear ribosomal DNA: implications from biogeography and concerted evolution. Proceedings of the National Academy of Sciences, USA, 92, 6813-6817. |
[95] | Sang T, Donoghue MJ, Zhang D (1997) Evolution of alcohol dehydrogenase genes in peonies (Paeonia): phylogenetic relationships of putative nonhybrid species. Molecular Biology and Evolution, 14, 994-1007. |
[96] | Sankararaman S, Patterson N, Li H, Pääbo S, Reich D (2012) The date of interbreeding between Neandertals and modern humans. PLoS Genetics, 8, e1002947. |
[97] | Sankararaman S, Mallick S, Dannemann M, Prüfer K, Kelso J, Pääbo S, Patterson N, Reich D (2014) The genomic landscape of Neanderthal ancestry in present-day humans. Nature, 507, 354-357. |
[98] | Schemske DW (2000) Understanding the origin of species. Evolution, 54, 1069-1073. |
[99] | Schierenbeck KA, Ellstrand NC (2009) Hybridization and the evolution of invasiveness in plants and other organisms. Biological Invasions, 11, 1093-1105. |
[100] | Schumer M, Cui R, Powell DL, Dresner R, Rosenthal GG, Andolfatto P (2014a) High-resolution mapping reveals hundreds of genetic incompatibilities in hybridizing fish species. eLife, 3, e02535. |
[101] | Schumer M, Cui R, Rosenthal GG, Andolfatto P (2015) Reproductive isolation of hybrid populations driven by genetic incompatibilities. PLoS Genetics, 11, e1005041. |
[102] | Schumer M, Rosenthal GG, Andolfatto P (2014b) How common is homoploid hybrid speciation? Evolution, 68, 1553-1560. |
[103] | Schwarz D, Matta BM, Shakir-Botteri NL, McPheron BA (2005) Host shifts to an invasive plant triggers rapid animal hybrid speciation. Nature, 436, 546-549. |
[104] | Smedmark JE, Eriksson T, Evans RC, Campbell CS (2003) Ancient allopolyploid speciation in Geinae (Rosaceae): evidence from nuclear granule-bound starch synthase (GBSSI) gene sequences. Systematic Biology, 52, 374-385. |
[105] | Soltis DE, Soltis PS (1993) Molecular data and the dynamic nature of polyploidy. Critical Reviews in Plant Sciences, 12, 243-273. |
[106] | Stace CA (1975) Introductory. In: Hybridization and Flora of the British Isles (ed. Stace CA), pp. 1-90. Academic Press, London. |
[1] | 蒲佳佳, 杨平俊, 戴洋, 陶可欣, 高磊, 杜予州, 曹俊, 俞晓平, 杨倩倩. 长江下游外来生物福寿螺的种类及其种群遗传结构[J]. 生物多样性, 2023, 31(3): 22346-. |
[2] | 金恒镳. 从天择到人择: 在华莱士的肩膀上看地球的未来[J]. 生物多样性, 2023, 31(12): 23267-. |
[3] | 肖钰, 王茜, 何梓晗, 李玲玲, 胡新生. 基于生物学物种定义探讨物种形成理论与验证的研究进展[J]. 生物多样性, 2022, 30(5): 21480-. |
[4] | 薛成, 李波卡, 雷天宇, 山红艳, 孔宏智. 生物多样性起源与进化研究进展[J]. 生物多样性, 2022, 30(10): 22460-. |
[5] | 王瑞武, 李敏岚, 韩嘉旭, 王超. 适合度的相对性与路径依赖的自然选择[J]. 生物多样性, 2022, 30(1): 21323-. |
[6] | 王婷, 夏增强, 舒江平, 张娇, 王美娜, 陈建兵, 王慷林, 向建英, 严岳鸿. 全基因组复制事件的绝对定年揭示莲座蕨属植物的迟滞演化[J]. 生物多样性, 2021, 29(6): 722-734. |
[7] | 李敏岚, 王超, 王瑞武. 路径依赖下的物种形成机制[J]. 生物多样性, 2021, 29(3): 409-418. |
[8] | 张军, 彭焕文, 夏富才, 王伟. 青藏高原高山区和泛北极地区种子植物多倍体比较[J]. 生物多样性, 2021, 29(11): 1470-1480. |
[9] | 范兴科, 燕霞, 冯媛媛, 冉进华, 钱朝菊, 尹晓月, 周姗姗, 房庭舟, 马小飞. 红砂基因组大小变异及物种分化[J]. 生物多样性, 2021, 29(10): 1308-1320. |
[10] | 胡颖, 王茜, 张新新, 周玮, 陈晓阳, 胡新生. 叶绿体DNA标记在谱系地理学中的应用研究进展[J]. 生物多样性, 2019, 27(2): 219-234. |
[11] | 莫日根高娃, 商辉, 刘保东, 康明, 严岳鸿. 一个种还是多个种? 简化基因组及其形态学证据揭示中国白桫椤植物的物种多样性分化[J]. 生物多样性, 2019, 27(11): 1196-1204. |
[12] | 田代科, 李春, 肖艳, 付乃峰, 童毅, 吴瑞娟. 中国秋海棠属植物的自然杂交发生及其特点[J]. 生物多样性, 2017, 25(6): 654-674. |
[13] | 郑硕理, 田晓玲, 黄承玲, 王灵军, 冯元, 张敬丽. 结合分子手段和形态分析验证大白杜鹃与马缨杜鹃的自然杂交[J]. 生物多样性, 2017, 25(6): 627-637. |
[14] | 常艳芬. 铁角蕨科的多倍化与物种多样性形成[J]. 生物多样性, 2017, 25(6): 621-626. |
[15] | 魏宇昆, 黄艳波, 李桂彬. 同域分布共享传粉者的鼠尾草属植物的生殖隔离[J]. 生物多样性, 2017, 25(6): 608-614. |
阅读次数 | ||||||
全文 |
|
|||||
摘要 |
|
|||||
备案号:京ICP备16067583号-7
Copyright © 2022 版权所有 《生物多样性》编辑部
地址: 北京香山南辛村20号, 邮编:100093
电话: 010-62836137, 62836665 E-mail: biodiversity@ibcas.ac.cn