Biodiv Sci ›› 2019, Vol. 27 ›› Issue (9): 960-969. DOI: 10.17520/biods.2019101
Special Issue: 青藏高原生物多样性与生态安全
• Special Feature: Snow Leopards: Survey, Research and Conservation Status in China • Previous Articles Next Articles
Qi Lu1,2,Qiang Hu3,Xiaogang Shi3,Senlong Jin3,Sheng Li1,2,Meng Yao1,2,*()
Received:
2019-03-26
Accepted:
2019-06-06
Online:
2019-09-20
Published:
2019-09-25
Contact:
Meng Yao
Qi Lu,Qiang Hu,Xiaogang Shi,Senlong Jin,Sheng Li,Meng Yao. Metabarcoding diet analysis of snow leopards (Panthera uncia) in Wolong National Nature Reserve, Sichuan Province[J]. Biodiv Sci, 2019, 27(9): 960-969.
引物 Primer | 序列 Sequence (5′-3′) | 产物长度 Product length | 退火温度 Annealing temperature | 参考文献 Reference |
---|---|---|---|---|
16S | F: GAGAAGACCCTATGGAGC | ~380 bp | 50℃ | Xiong et al, 2016 |
R: ATAGAAACCGACCTGGAT | ||||
12SV5 | F: TAGAACAGGCTCCTCTAG | ~140 bp | 60℃ | Riaz et al, 2011 |
R: TTAGATACCCCACTATGC | ||||
UnciB | CTATGCTTAGCCCTAAACCTAGAT AGTTAGCTCAAACAAAACTAT-C3 | - | - | Shehzad et al, 2012a |
Table 1 Sequences of the primers used in the study
引物 Primer | 序列 Sequence (5′-3′) | 产物长度 Product length | 退火温度 Annealing temperature | 参考文献 Reference |
---|---|---|---|---|
16S | F: GAGAAGACCCTATGGAGC | ~380 bp | 50℃ | Xiong et al, 2016 |
R: ATAGAAACCGACCTGGAT | ||||
12SV5 | F: TAGAACAGGCTCCTCTAG | ~140 bp | 60℃ | Riaz et al, 2011 |
R: TTAGATACCCCACTATGC | ||||
UnciB | CTATGCTTAGCCCTAAACCTAGAT AGTTAGCTCAAACAAAACTAT-C3 | - | - | Shehzad et al, 2012a |
Fig. 1 The locations of snow leopard feces collected in Wolong National Nature Reserve (NNR), Sichuan Province. Snow leopard range map is from the IUCN Red List of Threatened Species.
研究地区 Study area | 样本数 No. of samples | 物种鉴定 方法 Species identification | 食性分析 方法 Diet analysis | 食物种类(出现频率) Prey taxa (FO) (%) | 参考文献 References | |||||
---|---|---|---|---|---|---|---|---|---|---|
野生有 蹄类 Wild ungulates | 中小型 哺乳类 Small mammals | 鸟类 Birds | 家畜 Livestock | 植物 Plant | 未鉴定 Unidentified items | |||||
巴基斯坦 Baltistan, Pakistan | 49 | DNA | 形态学 Morphology | 24.5 | 6.1 | 4.2 | 69.3 | 59.2 | 32.6 | Anwar et al, 2011 |
蒙古 South Gobi, Mongolia | 81 | DNA | DNA | 79.0 | - | 1.2 | 19.8 | - | - | Shehzad et al, 2012a |
尼泊尔 Manang, Nepal | 213 | 形态学 Morphology | 形态学 Morphology | 51.6 | 53.5 | 1.4 | 17.8 | - | - | Oli et al, 1994 |
尼泊尔 PinValley, Nepal | 51 | 形态学 Morphology | 形态学 Morphology | 56.9 | 3.9 | - | 23.6 | 25.5 | 5.9 | Bagchi & Mishra, 2006 |
尼泊尔 Kibber, Nepal | 44 | 形态学 Morphology | 形态学 Morphology | 29.6 | 6.8 | 15.9 | 38.5 | 27.3 | 19.5 | Bagchi & Mishra, 2006 |
塔吉克斯坦 Murghab, Tajikistan | 36 | DNA | 形态学 Morphology | 78.0 | 45.0 | - | - | - | - | Kachel et al, 2016 |
塔吉克斯坦 Madiyan, Tajikistan | 20 | DNA | 形态学 Morphology | 50.0 | 55.0 | - | 2.0 | - | - | Kachel et al, 2016 |
印度 Ladakh, India | 173 | 形态学 Morphology | 形态学 Morphology | 35.2 | 25.5 | 4.6 | 22.1 | 60.7 | - | Chundawat & Rawat, 1994 |
中国青海 Qinghai, China | 206 | 形态学 Morphology | 形态学 Morphology | 37.6 | 44.3 | - | 6.3 | 8.0 | 1.4 | Schaller, 1988 |
中国青海 Qinghai, China | 307 | 形态学 Morphology | 形态学 Morphology | 36.9 | 58.9 | 2.3 | 9.8 | 2.9 | 34.2 | Liu et al, 2003 |
中国青海 Qinghai, China | 250 | 形态学 Morphology | 形态学 Morphology | 67.6 | 17.6 | - | 16.0 | 18.0 | 6.4 | Li, 2012 |
中国新疆 Xinjiang, China | 16 | DNA | 形态学 Morphology | 50.0 | 112.5 | 81.3 | 156.3 | 25.0 | - | Wang et al, 2014 |
中国四川 Sichuan, China | 18 | DNA | DNA | 66.7 | 11.1 | 11.1 | 33.3 | - | - | 本研究 This study |
Table 3 A comparison of diet component of snow leopards from different regions
研究地区 Study area | 样本数 No. of samples | 物种鉴定 方法 Species identification | 食性分析 方法 Diet analysis | 食物种类(出现频率) Prey taxa (FO) (%) | 参考文献 References | |||||
---|---|---|---|---|---|---|---|---|---|---|
野生有 蹄类 Wild ungulates | 中小型 哺乳类 Small mammals | 鸟类 Birds | 家畜 Livestock | 植物 Plant | 未鉴定 Unidentified items | |||||
巴基斯坦 Baltistan, Pakistan | 49 | DNA | 形态学 Morphology | 24.5 | 6.1 | 4.2 | 69.3 | 59.2 | 32.6 | Anwar et al, 2011 |
蒙古 South Gobi, Mongolia | 81 | DNA | DNA | 79.0 | - | 1.2 | 19.8 | - | - | Shehzad et al, 2012a |
尼泊尔 Manang, Nepal | 213 | 形态学 Morphology | 形态学 Morphology | 51.6 | 53.5 | 1.4 | 17.8 | - | - | Oli et al, 1994 |
尼泊尔 PinValley, Nepal | 51 | 形态学 Morphology | 形态学 Morphology | 56.9 | 3.9 | - | 23.6 | 25.5 | 5.9 | Bagchi & Mishra, 2006 |
尼泊尔 Kibber, Nepal | 44 | 形态学 Morphology | 形态学 Morphology | 29.6 | 6.8 | 15.9 | 38.5 | 27.3 | 19.5 | Bagchi & Mishra, 2006 |
塔吉克斯坦 Murghab, Tajikistan | 36 | DNA | 形态学 Morphology | 78.0 | 45.0 | - | - | - | - | Kachel et al, 2016 |
塔吉克斯坦 Madiyan, Tajikistan | 20 | DNA | 形态学 Morphology | 50.0 | 55.0 | - | 2.0 | - | - | Kachel et al, 2016 |
印度 Ladakh, India | 173 | 形态学 Morphology | 形态学 Morphology | 35.2 | 25.5 | 4.6 | 22.1 | 60.7 | - | Chundawat & Rawat, 1994 |
中国青海 Qinghai, China | 206 | 形态学 Morphology | 形态学 Morphology | 37.6 | 44.3 | - | 6.3 | 8.0 | 1.4 | Schaller, 1988 |
中国青海 Qinghai, China | 307 | 形态学 Morphology | 形态学 Morphology | 36.9 | 58.9 | 2.3 | 9.8 | 2.9 | 34.2 | Liu et al, 2003 |
中国青海 Qinghai, China | 250 | 形态学 Morphology | 形态学 Morphology | 67.6 | 17.6 | - | 16.0 | 18.0 | 6.4 | Li, 2012 |
中国新疆 Xinjiang, China | 16 | DNA | 形态学 Morphology | 50.0 | 112.5 | 81.3 | 156.3 | 25.0 | - | Wang et al, 2014 |
中国四川 Sichuan, China | 18 | DNA | DNA | 66.7 | 11.1 | 11.1 | 33.3 | - | - | 本研究 This study |
食物类别 Prey taxa | 出现样品数 No. of occurrence | 出现频率 FO (%) | 相对序列丰度 RRA (%) |
---|---|---|---|
岩羊 Pseudois nayaur | 12 | 66.7 | 57.1 |
牦牛 Bos grunniens | 6 | 33.3 | 27.4 |
高原鼠兔Ochotona curzoniae | 1 | 5.5 | 0.5 |
红耳鼠兔Ochotona erythrotis | 1 | 5.5 | 5.6 |
鹡鸰科Motacillidae | 1 | 5.5 | 5.6 |
雉科 Phasianidae | 1 | 5.5 | 3.8 |
总计 Total | 100 |
Table 2 Prey species detected in the molecular diet analysis of snow leopard fecal samples (N = 18) in Wolong National Nature Reserve
食物类别 Prey taxa | 出现样品数 No. of occurrence | 出现频率 FO (%) | 相对序列丰度 RRA (%) |
---|---|---|---|
岩羊 Pseudois nayaur | 12 | 66.7 | 57.1 |
牦牛 Bos grunniens | 6 | 33.3 | 27.4 |
高原鼠兔Ochotona curzoniae | 1 | 5.5 | 0.5 |
红耳鼠兔Ochotona erythrotis | 1 | 5.5 | 5.6 |
鹡鸰科Motacillidae | 1 | 5.5 | 5.6 |
雉科 Phasianidae | 1 | 5.5 | 3.8 |
总计 Total | 100 |
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