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基于DNA宏条形码的江苏宿迁高粱—小麦轮作农田节肢动物群落长期动态研究

金倩1, 王卫军1, 潘明泉1, 杨珂1, 沈伟3, 朱超4, 姜雷4, 赖上坤1*, 张爱兵2*   

  1. 1. 江苏省农业科学院宿迁农科所, 江苏宿迁 223800 2. 首都师范大学生命科学学院, 北京 100048 3. 宿迁市气象局, 江苏宿迁 223800 4. 江苏洋河股份有限公司, 江苏宿迁 223800
  • 收稿日期:2025-10-21 修回日期:2026-05-28 接受日期:2026-08-12
  • 通讯作者: 赖上坤, 张爱兵

DNA metabarcoding reveals long-term arthropod community dynamics in a sorghum–wheat rotation field in Suqian, Jiangsu, China

Qian Jin1, Weijun Wang2, Mingquan Pan1, Ke Yang1, Wei Shen3, Chao Zhu4, Lei Jiang4, Shangkun Lai1*, Aibing Zhang2*   

  1. 1 Suqian Institute of Jiangsu Academy of Agricultural Sciences, Suqian, Jiangsu 223800, China 

    2 College of Life Sciences, Capital Normal University, Beijing 100048, China 

    3 Suqian Meteorological Bureau, Suqian, Jiangsu 223800, China 

    4 Yanghe Distillery Co. Ltd., Suqian, Jiangsu 223800, China

  • Received:2025-10-21 Revised:2026-05-28 Accepted:2026-08-12
  • Contact: Shangkun Lai, Aibing Zhang

摘要: 揭示农田节肢动物群落动态是理解天敌-害虫互作关系和评估自然控害潜力的重要基础。高粱-小麦轮作过程中作物季节更替、植被结构变化和气象波动可能共同影响节肢动物群落组成, 但相关长期连续监测资料仍较少。本研究以江苏宿迁一个高粱-小麦轮作长期定位样地为对象, 于2019–2023年利用马来氏网(Malaise trap)连续采集节肢动物样本, 并基于COI (cytochrome c oxidase subunit I)基因DNA宏条形码技术对64组样本进行可操作分类单元(operational taxonomic unit, OTU)聚类和分类注释, 分析不同年份、季节和作物阶段节肢动物群落组成、多样性及主要天敌类群相对丰度变化, 并结合气象数据探讨其与降雨量、温度和日照时数的关系。结果表明: (1)双翅目为该样地节肢动物群落中的主要优势类群, 其中食蚜蝇科和瓢虫科为重要天敌类群; (2) OTU层面α多样性无显著年际差异(P > 0.05), 但在季节间存在显著差异(P < 0.05), 夏季多样性相对较高, 且与温度呈显著正相关(P < 0.01); (3) β多样性分析表明, 高粱季与小麦季的样本群落组成的主坐标分析 (principal coordinates analysis, PCoA)存在显著差异(P < 0.001); (4)主要天敌类群的相对丰度与部分气象因子存在相关关系, 其中食蚜蝇科相对丰度与日照时数呈正相关(P < 0.05), 而与降雨量、温度呈负相关(P < 0.01), 瓢虫科相对丰度表现出一定的季节性波动; (5)混合效应模型显示, 在将年份作为随机效应纳入控制后, 作物类型和季节的单一主效应均不显著, 但不同作物-季节组合在2019–2023年间呈现出差异化变化趋势, 提示该样地节肢动物群落动态可能受作物更替、季节转换和年际环境波动的共同影响。本研究提供了江苏宿迁高粱-小麦轮作农田节肢动物群落5年连续监测资料, 揭示了该样地节肢动物群落组成和主要天敌类群的时间动态特征。鉴于本研究基于单一样地开展, 缺乏空间重复和对照样地, 且DNA宏条形码相对丰度不能直接等同于个体数量, 相关结果主要反映该监测样地的长期动态特征, 不宜作为高粱-小麦轮作系统的一般规律。

关键词: DNA宏条形码, 高粱-小麦轮作, 节肢动物群落, 长期监测, 天敌昆虫, 气象因子

Abstract

Aims: Temporal dynamics of arthropod communities in agricultural ecosystems are fundamental for understanding trophic interactions, evaluating the potential contribution of natural enemies to pest suppression, and improving ecologically based integrated pest management strategies. In crop rotation systems, seasonal crop succession is often accompanied by changes in vegetation structure, resource availability, microhabitat conditions, and meteorological background, all of which may influence arthropod community composition and the relative dominance of different functional taxa. However, continuous multi-year monitoring data for arthropod communities in sorghum-wheat rotation fields remain limited. In this study, we used DNA metabarcoding to investigate arthropod community dynamics in a long-term fixed monitoring field under sorghum-wheat rotation in Suqian, Jiangsu Province, China, from 2019 to 2023. Specifically, we aimed to describe temporal variation in arthropod community composition and diversity across years, seasons, and crop stages, and to preliminarily explore the associations between major arthropod taxa and meteorological factors. 

Methods: Arthropods were collected using a Malaise trap from a fixed monitoring site located in a sorghum-wheat rotation field in Siyang County, Suqian, Jiangsu Province. Sorghum was cultivated from June to October, and winter wheat was cultivated from November to May of the following year. A total of 64 arthropod samples were collected during the five-year monitoring period. DNA was extracted from each sample, and the mitochondrial cytochrome c oxidase subunit I gene (COI) was amplified and sequenced for metabarcoding analysis. Operational taxonomic units (OTUs) were clustered at 97% sequence similarity and taxonomically annotated using the BOLD database. Because of limitations in public reference databases and potential uncertainties in species-level assignment, subsequent analyses focused mainly on order- and family-level taxonomic composition rather than species-level identification. Arthropod community composition was summarized by year, season, and crop stage. Alpha diversity was estimated using the Shannon index based on the OTU composition matrix. Beta diversity was evaluated using Bray-Curtis dissimilarity followed by principal coordinates analysis (PCoA), and group differences were tested using analysis of similarities (ANOSIM). Monthly meteorological variables, including precipitation, temperature-related indices, and sunshine duration, were matched with arthropod community data. Spearman rank correlation analysis was used to explore associations between environmental factors and the relative abundance of major arthropod taxa. In addition, mixed-effects models were used to evaluate the effects of crop type, season, year, and their interactions on community relative abundance patterns. 

Results: Diptera was the dominant arthropod order throughout the monitoring period, indicating its consistently high relative abundance in this field. At the family level, Syrphidae and Coccinellidae were identified as important natural enemy taxa, although their relative abundance varied among years and seasons. OTU-level alpha diversity did not differ significantly among years (P > 0.05), suggesting relatively stable interannual diversity at the monitored site. In contrast, alpha diversity differed significantly among seasons (P < 0.05), with a relatively higher Shannon index in summer. Alpha diversity was positively correlated with temperature-related variables (P < 0.01). Beta diversity analysis based on Bray-Curtis dissimilarity showed clear differences in community composition between the sorghum and wheat seasons, and ANOSIM confirmed that this difference was statistically significant (P < 0.001). Meteorological factors were associated with variation in the relative abundance of several major taxa. The relative abundance of Syrphidae was positively correlated with sunshine duration (P < 0.05), but negatively correlated with precipitation and temperature-related variables (P < 0.01). The relative abundance of Coccinellidae showed more evident seasonal fluctuations. The mixed-effects model showed that, after including year as a random effect, the single main effects of crop type and season were not significant. However, different crop - season combinations exhibited divergent temporal trends from 2019 to 2023, suggesting that arthropod community dynamics at this site may be jointly influenced by crop succession, seasonal transitions, and interannual environmental fluctuations. 

Conclusion: This study provides a five-year time-series dataset describing arthropod community composition, OTU-level diversity, and the relative abundance dynamics of major natural enemy taxa in a sorghum-wheat rotation field in Suqian, Jiangsu Province. The results suggest that arthropod community structure and natural enemy taxa in this monitored field were associated with crop-season transitions and meteorological variation. However, this study was conducted at a single fixed monitoring site without spatial replication or control fields. In addition, relative abundance derived from DNA metabarcoding may be affected by primer bias, DNA extraction efficiency, biomass differences, mitochondrial copy number variation, and reference database completeness, and therefore should not be interpreted as equivalent to individual abundance obtained from traditional morphological surveys. Thus, the findings should be regarded as field-specific temporal patterns rather than general rules for all sorghum-wheat rotation systems. Future studies should incorporate replicated monitoring across multiple sites, morphological validation, pest population data, functional group classification, and finer-resolution environmental measurements to further clarify the mechanisms shaping arthropod communities in crop rotation farmlands.

Key words: DNA metabarcoding, sorghum-wheat rotation, arthropod community, long-term monitoring, natural enemies, meteorological factors