生物多样性 ›› 2017, Vol. 25 ›› Issue (8): 874-885. DOI: 10.17520/biods.2016314
李文英1,2,3,*(
), 李夏1, 解开治1, 邓旺秋2, 庄文颖3
收稿日期:2017-07-25
接受日期:2017-08-15
出版日期:2017-08-20
发布日期:2017-08-31
通讯作者:
李文英
作者简介:# 共同第一作者
基金资助:
Wenying Li1,2,3,*(), Xia Li1, Kaizhi Xie1, Wangqiu Deng2, Wenying Zhuang3
Received:2017-07-25
Accepted:2017-08-15
Online:2017-08-20
Published:2017-08-31
Contact:
Li Wenying
About author:# Co-first authors
摘要：
葡萄座腔菌科的真菌是子囊菌中重要的代表性类群, 是农林生态系统中重要的组成部分。该类真菌物种资源丰富、全型特征多样, 包括许多具有重要经济价值和生态功能的类群, 隶属子囊菌门(Ascomycota)果囊菌亚门(Pezizomycotina)座囊菌纲(Dothideomycetes)葡萄座腔菌目(Botryosphaeriales)。本文在概述葡萄座腔科真菌生态功能的基础上, 回顾了一百年来该类真菌目、科、属和种各级分类单元的建立及其系统分类研究历史, 重点评述以von Arx & Müller和Barr提出的两大分类系统, 总结了基于全型形态特征和多基因序列分析的现代分子系统学研究现状。虽然该类群的分类系统日趋完善, 但中国的相关研究存在资源挖掘不够深入、研究的系统性不足等问题。主要针对资源挖掘必要性、分类依据科学性、物种特征全息化等几个方面存在的问题进行了分析和讨论, 并对未来研究方向进行展望, 以期为该类真菌的深入研究与开发利用提供科学依据。
李文英, 李夏, 解开治, 邓旺秋, 庄文颖 (2017) 葡萄座腔菌科真菌的系统学和多样性探讨. 生物多样性, 25, 874-885. DOI: 10.17520/biods.2016314.
Wenying Li, Xia Li, Kaizhi Xie, Wangqiu Deng, Wenying Zhuang (2017) Systematics and species diversity of botryosphaeriaceous fungi. Biodiversity Science, 25, 874-885. DOI: 10.17520/biods.2016314.
图1 葡萄座腔菌科属种多样性
Fig. 1 Diversity of genera and species in Botryosphaeriaceae
图2 葡萄座腔菌科研究进展年代记事表
Fig. 2 The chronicle table on research progresses in Botryosphaeriaceae
| 存在的问题 Comments | 主要文献 References | |
|---|---|---|
| 葡萄座腔菌科 Botryosphaeriaceae | 模式科; 属种的分类与名称需要修订 Type family, many genera and species need to be corrected | Crous et al, 2006; Liu et al, 2012; Slippers et al, 2013; Phillips et al, 2013 |
| Barriopsis A. J. L. Phillips et al, 2008 | 具分子证据, 但标本材料较少 A few molecular data, lack of fresh collections | Phillips et al, 2008; Abdollahzadeh et al, 2009; Doilom et al, 2014 |
| Botryobambusa R. Phookamsak et al, 2012 | 单种属; 竹生, 具分子证据和全型特征 Monotypic genus on bamboo, some molecular data and holomorph characteristics | Liu et al, 2012; Hyde et al, 2013 |
| 葡萄座腔菌属 Botryosphaeria Ces. & De Not, 1863 | 模式属; 存在复合种, 大量记录名称仍需订正 Type genus, remaining species complex, lots of epithets need to be corrected | Denman et al, 2000; Slippers et al, 2004; Abdollahzadeh et al, 2013; Phillips et al, 2013 |
| 棺孢腔菌属 Cophinforma Doilom et al, 2012 | 具分子证据及全型特征, 需更多材料 A few molecular data and holomorph characteristics, lack of more fresh collections | Mehl et al, 2011; Liu et al, 2012; Phillips et al, 2013 |
| 色二孢属 Diplodia Fr, 1834 | 常见属; 大量记录名称需要清理与订正 Common genus, lots of epithets need to be corrected | Alves et al, 2004, 2014; Phillips et al, 2012, 2013 |
| 小穴壳孢属 Dothiorella Sacc, 1880 | 常见属; 大量记录名称需要订正, 缺乏有性材料 Common genus, lots of epithets need to be corrected, lack of teleomorph collections | Crous et al, 2006; Phillips et al, 2008; Phillips et al, 2013; Abdollahzadeh et al, 2014 |
| Endomelanconiopsis E. I. Rojas & Samuels, 2008 | 具分子证据, 缺少有性特征材料 A few molecular data, lack of teleomorph collections | Rojas et al, 2008; Hyde et al, 2013 |
| 毛色二孢属 Lasiodiplodia Ellis & Everh, 1896 | 常见属; 具分子证据, 但有性特征材料较少 Common genus, some molecular data, but lack of fresh teleomorph collections | Alves et al, 2008; Abdollahzadeh et al, 2010; Phillips et al, 2008, 2013 |
| 亚大茎点菌属 Macrophomina Petr, 1923 | 较小属; 缺少更多分子证据及有性特征材料 Minor genus, lack of more molecular data and fresh teleomorph collections | Crous et al, 2006; Liu et al, 2012; Sarr et al, 2014 |
| Neodeightonia C. Booth, 1970 | 新修订属; 具全型特征及分子证据 Revised genus, a few molecular data and holomorph characteristics | Punithalingam, 1969; Phillips et al, 2008, 2013; Liu et al, 2010, 2012; Hyde et al, 2013 |
| 新壳梭孢属 Neofusicoccum Crous, 2006 | 常见属; 具分子证据及全型特征 Common genus, a few molecular data and holomorph characteristics | Crous et al, 2006; Abdollahzadeh et al, 2013; Phillips et al, 2013; Hyde et al, 2014 |
| 新暗色柱节孢属 Neoscytalidium Crous & Slippers, 2006 | 具分子证据, 缺少有性特征材料 A few molecular data, lack of fresh teleomorph collections | Crous et al, 2006; Chuang et al, 2012; Lan et al, 2012; Phillips et al, 2013 |
| 暗葡腔菌属 Phaeobotryon Theiss. & Syd, 1915 | 新修订属; 具分子证据, 缺少全型特征材料 Revised genus, a few molecular data, lack of fresh holomorph collections | Phillips et al, 2008; Abdollahzadeh et al, 2009; Fan et al, 2015 |
| 拟壳梭孢属 Pseudofusicoccum Mohali, Slippers & M. J. Wingf, 2006 | 具分子证据, 缺少有性特征材料 A few molecular data, lack of fresh teleomorph collections | Crous et al, 2006; Pavlic et al, 2008; Mehl et al, 2011 |
| 斯潘氏菌属 Spencermartinsia A. J. L. Phillips et al, 2008 | 具较多分子证据, 缺乏有型特征材料 Some molecular data, lack of fresh teleomorph collections | Phillips et al, 2008; Abdollahzadeh et al, 2014 |
| 拟球壳霉属 Sphaeropsis Sacc, 1880 | 常见属; 大量记录名称需要清理与订正 Common genus, lots of epithets need to be corrected | Palmer et al, 1987; Phillips et al, 2008, 2013; Liu et al, 2012; Slippers et al, 2013 |
| Tiarosporella Höhn, 1919 | 具分子证据, 属内成员需进一步清理与订正 A few molecular data, lots of members need to be corrected | Liu et al, 2012; Jami et al, 2012 |
表1 葡萄座腔菌科及其各属研究进展和存在问题
Table 1 Research progresses and comments of genera in Botryosphaeriaceae
| 存在的问题 Comments | 主要文献 References | |
|---|---|---|
| 葡萄座腔菌科 Botryosphaeriaceae | 模式科; 属种的分类与名称需要修订 Type family, many genera and species need to be corrected | Crous et al, 2006; Liu et al, 2012; Slippers et al, 2013; Phillips et al, 2013 |
| Barriopsis A. J. L. Phillips et al, 2008 | 具分子证据, 但标本材料较少 A few molecular data, lack of fresh collections | Phillips et al, 2008; Abdollahzadeh et al, 2009; Doilom et al, 2014 |
| Botryobambusa R. Phookamsak et al, 2012 | 单种属; 竹生, 具分子证据和全型特征 Monotypic genus on bamboo, some molecular data and holomorph characteristics | Liu et al, 2012; Hyde et al, 2013 |
| 葡萄座腔菌属 Botryosphaeria Ces. & De Not, 1863 | 模式属; 存在复合种, 大量记录名称仍需订正 Type genus, remaining species complex, lots of epithets need to be corrected | Denman et al, 2000; Slippers et al, 2004; Abdollahzadeh et al, 2013; Phillips et al, 2013 |
| 棺孢腔菌属 Cophinforma Doilom et al, 2012 | 具分子证据及全型特征, 需更多材料 A few molecular data and holomorph characteristics, lack of more fresh collections | Mehl et al, 2011; Liu et al, 2012; Phillips et al, 2013 |
| 色二孢属 Diplodia Fr, 1834 | 常见属; 大量记录名称需要清理与订正 Common genus, lots of epithets need to be corrected | Alves et al, 2004, 2014; Phillips et al, 2012, 2013 |
| 小穴壳孢属 Dothiorella Sacc, 1880 | 常见属; 大量记录名称需要订正, 缺乏有性材料 Common genus, lots of epithets need to be corrected, lack of teleomorph collections | Crous et al, 2006; Phillips et al, 2008; Phillips et al, 2013; Abdollahzadeh et al, 2014 |
| Endomelanconiopsis E. I. Rojas & Samuels, 2008 | 具分子证据, 缺少有性特征材料 A few molecular data, lack of teleomorph collections | Rojas et al, 2008; Hyde et al, 2013 |
| 毛色二孢属 Lasiodiplodia Ellis & Everh, 1896 | 常见属; 具分子证据, 但有性特征材料较少 Common genus, some molecular data, but lack of fresh teleomorph collections | Alves et al, 2008; Abdollahzadeh et al, 2010; Phillips et al, 2008, 2013 |
| 亚大茎点菌属 Macrophomina Petr, 1923 | 较小属; 缺少更多分子证据及有性特征材料 Minor genus, lack of more molecular data and fresh teleomorph collections | Crous et al, 2006; Liu et al, 2012; Sarr et al, 2014 |
| Neodeightonia C. Booth, 1970 | 新修订属; 具全型特征及分子证据 Revised genus, a few molecular data and holomorph characteristics | Punithalingam, 1969; Phillips et al, 2008, 2013; Liu et al, 2010, 2012; Hyde et al, 2013 |
| 新壳梭孢属 Neofusicoccum Crous, 2006 | 常见属; 具分子证据及全型特征 Common genus, a few molecular data and holomorph characteristics | Crous et al, 2006; Abdollahzadeh et al, 2013; Phillips et al, 2013; Hyde et al, 2014 |
| 新暗色柱节孢属 Neoscytalidium Crous & Slippers, 2006 | 具分子证据, 缺少有性特征材料 A few molecular data, lack of fresh teleomorph collections | Crous et al, 2006; Chuang et al, 2012; Lan et al, 2012; Phillips et al, 2013 |
| 暗葡腔菌属 Phaeobotryon Theiss. & Syd, 1915 | 新修订属; 具分子证据, 缺少全型特征材料 Revised genus, a few molecular data, lack of fresh holomorph collections | Phillips et al, 2008; Abdollahzadeh et al, 2009; Fan et al, 2015 |
| 拟壳梭孢属 Pseudofusicoccum Mohali, Slippers & M. J. Wingf, 2006 | 具分子证据, 缺少有性特征材料 A few molecular data, lack of fresh teleomorph collections | Crous et al, 2006; Pavlic et al, 2008; Mehl et al, 2011 |
| 斯潘氏菌属 Spencermartinsia A. J. L. Phillips et al, 2008 | 具较多分子证据, 缺乏有型特征材料 Some molecular data, lack of fresh teleomorph collections | Phillips et al, 2008; Abdollahzadeh et al, 2014 |
| 拟球壳霉属 Sphaeropsis Sacc, 1880 | 常见属; 大量记录名称需要清理与订正 Common genus, lots of epithets need to be corrected | Palmer et al, 1987; Phillips et al, 2008, 2013; Liu et al, 2012; Slippers et al, 2013 |
| Tiarosporella Höhn, 1919 | 具分子证据, 属内成员需进一步清理与订正 A few molecular data, lots of members need to be corrected | Liu et al, 2012; Jami et al, 2012 |
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