Biodiv Sci ›› 2018, Vol. 26 ›› Issue (7): 655-666. DOI: 10.17520/biods.2018060
• Original Papers: Plant Diversity • Next Articles
Dexin Sun, Xiang Liu, Shurong Zhou*()
Received:
2018-02-21
Accepted:
2018-04-24
Online:
2018-07-20
Published:
2018-09-26
Contact:
Zhou Shurong
About author:
# Co-first authors
Dexin Sun, Xiang Liu, Shurong Zhou. Dynamical changes of diversity and community assembly during recovery from a plant functional group removal experiment in the alpine meadow[J]. Biodiv Sci, 2018, 26(7): 655-666.
Fig. 1 Changes in species diversity (mean ± SE) during restoration. Legends show the combination of functional groups: Poaceae and Cyperaceae (A), Asteraceae (B), Fabaceae (C), others (D) and rare species (X).
Fig. 2 Changes in functional diversity (mean ± SE) during restoration. Legends show the combination of functional groups: Poaceae and Cyperaceae (A), Asteraceae (B), Fabaceae (C), others (D) and rare species (X).
Fig. 3 Changes in phylogenetic diversity (mean ± SE) during restoration. Legends show the combination of functional groups: Poaceae and Cyperaceae (A), Asteraceae (B), Fabaceae (C), others (D) and rare species (X).
Fig. 4 Changes in relative abundance of different functional groups during restoration. Legends show functional groups: Poaceae and Cyperaceae (A), Asteraceae (B), Fabaceae (C), and others (D).
Fig. 6 The patterns of phylogeny and functional trait during restoration (mean ± SE). Legends show the combination of functional groups: Poaceae and Cyperaceae (A), Asteraceae (B), Fabaceae (C), others (D) and rare species (X).
Fig. 7 The relationship between SES.βMPD / SES.βMFD of extinct species / colonists to residents and initial phylogenetic diversity / functional diversity
[1] | Bhaskar R, Dawson TE, Balvanera P (2014) Community assembly and functional diversity along succession post-management. Functional Ecology, 28, 1256-1265. |
[2] | Brakenhielm S, Liu Q (1998) Long-term effects of clear-felling on vegetation dynamics and species diversity in a boreal pine forest. Biodiversity and Conservation, 7, 207-220. |
[3] | Cadotte MW (2017) Functional traits explain ecosystem function through opposing mechanisms. Ecology Letters, 20, 989-996. |
[4] | Cavender-Bares J, Kozak KH, Fine PVA, Kembel SW (2009) The merging of community ecology and phylogenetic biology. Ecology Letters, 12, 693-715. |
[5] | Chase JM (2003) Community assembly: When should history matter? Oecologia, 136, 489-498. |
[6] | Chazdon RL (2003) Tropical forest recovery: Legacies of human impact and natural disturbances. Perspectives in Plant Ecology,Evolution and Systematics, 6, 51-71. |
[7] | Che YD, Liu MX, Li LR, Jiao J, Xiao W (2017) Exploring the community assembly of subalpine meadow communities based on functional traits and community phylogeny. Chinese Journal of Plant Ecology, 41, 1157-1167. (in Chinese with English abstract) |
[车应弟, 刘旻霞, 李俐蓉, 焦骄, 肖卫 (2017) 基于功能性状及系统发育的亚高寒草甸群落构建. 植物生态学报, 41, 1157-1167.] | |
[8] | Clements FE (1916) Plant Succession: An Analysis of the Development of Vegetation. Carnegie Institution of Washington, Washington, DC. |
[9] | Connell JH, Slatyer RO (1977) Mechanisms of succession in natural communities and their role in community stability and organization. The American Naturalist, 111, 1119-1144. |
[10] | Deng L, Shangguan Z, Sweeney S (2015) “Grain for Green” driven land use change and carbon sequestration on the Loess Plateau, China. Scientific Reports, 4, 7039. |
[11] | Díaz S, Hodgson JG, Thompson K, Cabido M, Cornelissen JHC, Jalili A, Montserratmarti G, Grime JP, Zarrinkamar F, Asri Y (2004) The plant traits that drive ecosystems: Evidence from three continents. Journal of Vegetation Science, 15, 295-304. |
[12] | Faith DP (1992) Conservation evaluation and phylogenetic diversity. Biological Conservation, 61, 1-10. |
[13] | Flynn DFB, Mirotchnick N, Jain M, Palmer MI, Naeem S (2011) Functional and phylogenetic diversity as predictors of biodiversity-ecosystem function relationships. Ecology, 92, 1573-1581. |
[14] | Fukami T, Nakajima M (2011) Community assembly: Alternative stable states or alternative transient states? Ecology Letters, 14, 973-984. |
[15] | Fukami T, Bezemer TM, Mortimer SR, der Putten WH (2005) Species divergence and trait convergence in experimental plant community assembly. Ecology Letters, 8, 1283-1290. |
[16] | Gleason HA (1927) Further views on the succession-concept. Ecology, 8, 299-326. |
[17] | Götzenberger L, de Bello F, Bråthen KA, Davison J, Dubuis A, Guisan A, Lepš J, Lindborg R, Moora M, Pärtel M (2012) Ecological assembly rules in plant communities—Approaches, patterns and prospects. Biological Reviews, 87, 111-127. |
[18] | Guindon S, Dufayard J, Lefort V, Anisimova M, Hordijk W, Gascuel O (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: Assessing the performance of PhyML 3.0. Systematic Biology, 59, 307-321. |
[19] | Holl KD (1999) Factors limiting tropical rain forest regeneration in abandoned pasture: Seed rain, seed germination, microclimate, and soil. Biotropica, 31, 229-242. |
[20] | Hooper DU, Vitousek PM (1997) The effects of plant composition and diversity on ecosystem processes. Science, 277, 1302-1305. |
[21] | Kembel SW, Cowan PD, Helmus MR, Cornwell WK, Morlon H, Ackerly DD, Blomberg SP, Webb CO (2010) Picante: R tools for integrating phylogenies and ecology. Bioinformatics, 26, 1463-1464. |
[22] | Kress WJ, Erickson DL, Swenson NG, Thompson J, Uriarte M, Zimmerman JK (2010) Advances in the use of DNA barcodes to build a community phylogeny for tropical trees in a Puerto Rican forest dynamics plot. PLoS ONE, 5, e15409. |
[23] | Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R (2007) Clustal W and Clustal X Version 2.0. Bioinformatics, 23, 2947-2948. |
[24] | Li S, Cadotte MW, Meiners SJ, Hua Z, Jiang L, Shu W (2015) Species colonisation, not competitive exclusion, drives community overdispersion over long-term succession. Ecology Letters, 18, 964-973. |
[25] | Liu J, Zhang X, Song F, Zhou S, Cadotte MW, Bradshaw CJA (2015) Explaining maximum variation in productivity requires phylogenetic diversity and single functional traits. Ecology, 96, 176-183. |
[26] | Liu X, Lü S, Sun D, Bradshaw CJA, Zhou S (2017) Species decline under nitrogen fertilization increases community-level competence of fungal diseases. Proceedings of the Royal Society B: Biological Sciences, 284, 20162621. |
[27] | Luh HK, Pimm SL (1993) The assembly of ecological communities: A minimalis approach. Journal of Animal Ecology, 62, 749-765. |
[28] | Lü S, Liu X, Venail P, Zhou S (2017) Functional dissimilarity, not phylogenetic relatedness, determines interspecific interactions among plants in the Tibetan alpine meadows. Oikos, 126, 381-388. |
[29] | Mayfield MM, Levine JM (2010) Opposing effects of competitive exclusion on the phylogenetic structure of communities. Ecology Letters, 13, 1085-1093. |
[30] | Miao N, Zhou ZL, Shi ZM, Feng QH (2014) Successional dynamics of community structure and species diversity after clear-cutting of faxon fir (Abies faxoniana) forest stands. Acta Ecologica Sinica, 34, 3661-3671. (in Chinese with English abstract) |
[缪宁, 周珠丽, 史作民, 冯秋红 (2014) 岷江冷杉林皆伐后次生群落结构和物种多样性的演替动态. 生态学报, 34, 3661-3671.] | |
[31] | Paradis E, Claude J, Strimmer K (2004) APE: Analyses of phylogenetics and evolution in R language. Bioinformatics, 20, 289-290. |
[32] | Pascarella JB, Aide TM, Serrano MI, Zimmerman JK (2000) Land-use history and forest regeneration in the Cayey Mountains, Puerto Rico. Ecosystems, 3, 217-228. |
[33] | Peay KG, Belisle M, Fukami T (2012) Phylogenetic relatedness predicts priority effects in nectar yeast communities. Proceedings of the Royal Society of London B: Biological Sciences, 279, 749-758. |
[34] | Petchey OL, Gaston KJ (2002) Functional diversity (FD), species richness and community composition. Ecology Letters, 5, 402-411. |
[35] | Pielou EC (1966) Species-diversity and pattern-diversity in the study of ecological succession. Journal of Theoretical Biology, 10, 370-383. |
[36] | Platt WJ, Connell JH (2003) Natural disturbances and directional replacement of species. Ecological Monographs, 73, 507-522. |
[37] | Purschke O, Schmid BC, Sykes MT, Poschlod P, Michalski SG, Durka W, Kühn I, Winter M, Prentice HC (2013) Contrasting changes in taxonomic, phylogenetic and functional diversity during a long-term succession: Insights into assembly processes. Journal of Ecology, 101, 857-866. |
[38] | R Core Team (2017) R: A Language and Environment for Statistical Computing. Vienna, Austria. . (accessed on 2017-11-30) |
[39] | Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572-1574. |
[40] | Samuels CL, Drake JA (1997) Divergent perspectives on community convergence. Trends in Ecology & Evolution, 12, 427-432. |
[41] | Sanderson MJ (2002) Estimating absolute rates of molecular evolution and divergence times: A penalized likelihood approach. Molecular Biology and Evolution, 19, 101-109. |
[42] | Schliep KP (2011) phangorn: Phylogenetic analysis in R. Bioinformatics, 27, 592-593. |
[43] | Shannon CE (1948) A mathematical theory of communication. Bell System Technical Journal, 27, 379-423. |
[44] | Simpson EH (1949) Measurement of diversity. Nature, 163, 688. |
[45] | Valientebanuet A, Verdu M (2013) Plant facilitation and phylogenetics. Annual Review of Ecology, Evolution, and Systematics, 44, 347-366. |
[46] | Venail P, Gross K, Oakley TH, Narwani A, Allan E, Flombaum P, Isbell F, Joshi J, Reich PB, Tilman D (2015) Species richness, but not phylogenetic diversity, influences community biomass production and temporal stability in a re-examination of 16 grassland biodiversity studies. Functional Ecology, 29, 615-626. |
[47] | Walker B, Kinzig A, Langridge J (1999) Plant attribute diversity, resilience, and ecosystem function: The nature and significance of dominant and minor species. Ecosystems, 2, 95-113. |
[48] | Webb CO, Ackerly DD, McPeek MA, Donoghue MJ (2002) Phylogenies and community ecology. Annual Review of Ecology, Evolution, and Systematics, 33, 475-505. |
[49] | Yang YB, Xin XJ, Aide XC, Yang X, Wang SM, Chu CJ, Ren ZW, Wang G (2010) Plant diversity variations in zokor-mound communities along a successional stage in sub-alpine meadow. Acta Prataculturae Sinica, 19(1),14-20 (in Chinese with English abstract) |
[杨莹博, 辛小娟, 艾得协措, 杨雪, 王绍美, 储诚进, 任正炜, 王刚 (2010) 鼢鼠土丘植被恢复演替过程中的物种多样性变化. 草业学报, 19(1), 14-20.] | |
[50] | Zhao LY, Gao DD, Xiong BQ, Chen T, Li YQ, Li FR (2017) Relationship between the aboveground biomass and species diversity of sandy communities during the process of restoring succession in the Horqin Sandy Land, China. Acta Ecologica Sinica, 37, 4108-4117. (in Chinese with English abstract) |
[赵丽娅, 高丹丹, 熊炳桥, 陈涛, 李艳蔷, 李锋瑞 (2017) 科尔沁沙地恢复演替进程中群落物种多样性与地上生物量的关系. 生态学报, 37, 4108-4117.] |
[1] | Hong Qian, Jian Zhang, Jingchao Zhao. How many known vascular plant species are there in the world? An integration of multiple global plant databases [J]. Biodiv Sci, 2022, 30(7): 22254-. |
[2] | Zhengfei Li, Xiaoming Jiang, Jun Wang, Xingliang Meng, Junqian Zhang, Zhicai Xie. Species diversity and driving factors of benthic macroinvertebrate assemblages in the middle and lower reaches of the Yarlung Zangbo River [J]. Biodiv Sci, 2022, 30(6): 21431-. |
[3] | Xiaoyan Jiang, Shengjie Gao, Yan Jiang, Yun Tian, Xin Jia, Tianshan Zha. Species diversity, functional diversity, and phylogenetic diversity in plant communities at different phases of vegetation restoration in the Mu Us sandy grassland [J]. Biodiv Sci, 2022, 30(5): 21387-. |
[4] | Min Zhang, Chunpo Tian, Xianli Che, Yanyan Zhao, Shiwang Chen, Xia Zhou, Fasheng Zou. New bird records in Guangdong Province and their correlation with natural and social-economic factors [J]. Biodiv Sci, 2022, 30(5): 21396-. |
[5] | Taohua Yuan, Meijun Li, Liuyi Ren, Rongxin Huang, Yi Chen, Xinxiang Bai. A dataset on the diversity and geographical distributions of wild Impatiens in China [J]. Biodiv Sci, 2022, 30(5): 22019-. |
[6] | Jiang Qiao, Guoqing Jia, Huaming Zhou, Lin Gong, Yong Jiang, Nengwen Xiao, Xiaoqi Gao, Anxiang Wen, Jie Wang. Mammal and bird diversity recorded with camera traps in Gongga Mountain National Nature Reserve, Sichuan, China [J]. Biodiv Sci, 2022, 30(2): 20395-. |
[7] | Haiping Li, Zhuqing Xu, Zhihang Long. Conservation gap analysis of key protected and rare animals in Da Hinggan Range Region, China [J]. Biodiv Sci, 2022, 30(2): 21294-. |
[8] | Shengxian Chen, Xiting Zhang, Danqi She, Zhonghua Zhang, Zhiqiang Zhou, Huimei Wang, Wenjie Wang. Effects of plant species diversity, dominant species importance, and soil properties on glomalin-related soil protein [J]. Biodiv Sci, 2022, 30(2): 21115-. |
[9] | Jun Wang, Chao Zhao. Taxonomy, species diversity and distribution patterns of fungus-feeding Phlaeothripidae in China [J]. Biodiv Sci, 2022, 30(12): 22128-. |
[10] | Zixiao Dai, Guoke Chen, Naili Zhang, Keping Ma. A dataset on the diversity of forest vascular epiphytes in China [J]. Biodiv Sci, 2022, 30(11): 22332-. |
[11] | Qiuju Chen, Zhixian Sun, Xuejian Li, Rui Zhang, Rui Xi, Chen Tian, Xin Wang, Yingchun Xing, Yahui Zhao. Fish diversity of Wuyishan National Park and its adjacent areas [J]. Biodiv Sci, 2022, 30(11): 22260-. |
[12] | Yongqingcuomu , Xinqiang Xi, Kechang Niu. Effect of plant species loss on grassland caterpillar in alpine meadows [J]. Biodiv Sci, 2022, 30(11): 22069-. |
[13] | Huijie Qiao, Junhua Hu. Reconstructing community assembly using a numerical simulation model [J]. Biodiv Sci, 2022, 30(10): 22456-. |
[14] | Cheng Gao, Liang-Dong Guo. Progress on microbial species diversity, community assembly and functional traits [J]. Biodiv Sci, 2022, 30(10): 22429-. |
[15] | Shanlin Liu, Na Qiu, Shuyi Zhang, Zhunan Zhao, Xin Zhou. Application of genomics technology in biodiversity conservation research [J]. Biodiv Sci, 2022, 30(10): 22441-. |
Viewed | ||||||
Full text |
|
|||||
Abstract |
|
|||||
Copyright © 2022 Biodiversity Science
Editorial Office of Biodiversity Science, 20 Nanxincun, Xiangshan, Beijing 100093, China
Tel: 010-62836137, 62836665 E-mail: biodiversity@ibcas.ac.cn