Biodiv Sci ›› 2015, Vol. 23 ›› Issue (1): 50-60. DOI: 10.17520/biods.2014089
• Original Papers: Animal Diversity • Previous Articles Next Articles
Dangni Zhang3, Lianming Zheng1,2,3,*(), Jinru He3, Wenjing Zhang1,3, Yuanshao Lin1,3, Yang Li3
Received:
2014-05-09
Accepted:
2014-11-19
Online:
2015-01-20
Published:
2015-05-04
Contact:
Lianming Zheng
Dangni Zhang, Lianming Zheng, Jinru He, Wenjing Zhang, Yuanshao Lin, Yang Li. DNA barcoding of hydromedusae in northern Beibu Gulf for species identification[J]. Biodiv Sci, 2015, 23(1): 50-60.
分类组别 Taxonomy group | COI | 16S | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
计数值 N | 最小值 Min | 最大值 Max | 平均值 Mean | 标准差 S.D. | 计数值 N | 最小值 Min | 最大值 Max | 平均值 Mean | 标准差 S.D. | |
种内遗传距离 Intra-species | 194 | 0.000 | 0.033 | 0.008 | 0.005 | 320 | 0.000 | 0.047 | 0.006 | 0.010 |
种间遗传距离 Inter-species | 3,992 | 0.092 | 0.597 | 0.298 | 0.128 | 6,350 | 0.068 | 0.898 | 0.394 | 0.195 |
各属遗传距离 Intra-genus | 370 | 0.092 | 0.215 | 0.171 | 0.032 | 316 | 0.068 | 0.225 | 0.157 | 0.044 |
多管水母属 Aequorea | 41 | 0.126 | 0.160 | 0.148 | 0.016 | 75 | 0.085 | 0.127 | 0.109 | 0.014 |
和平水母属 Eirene | 323 | 0.092 | 0.215 | 0.173 | 0.032 | 220 | 0.068 | 0.225 | 0.174 | 0.036 |
真瘤水母属 Eutima | 6 | 0.203 | 0.212 | 0.208 | 0.003 | 15 | 0.184 | 0.189 | 0.187 | 0.002 |
玛拉水母属 Malagazzia | - | - | - | - | - | 6 | 0.069 | 0.069 | 0.069 | 0.000 |
各科遗传距离 Intra-family | 230 | 0.127 | 0.351 | 0.189 | 0.037 | 473 | 0.111 | 0.386 | 0.258 | 0.091 |
多管水母科 Aequoreidae | 12 | 0.127 | 0.159 | 0.145 | 0.010 | 16 | 0.111 | 0.125 | 0.117 | 0.005 |
双生水母科 Diphyidae | 9 | 0.347 | 0.351 | 0.349 | 0.002 | 169 | 0.360 | 0.386 | 0.373 | 0.007 |
和平水母科 Eirenidae | 206 | 0.155 | 0.233 | 0.185 | 0.017 | 277 | 0.114 | 0.261 | 0.200 | 0.035 |
触丝水母科 Lovenellidae | - | - | - | - | - | 6 | 0.202 | 0.205 | 0.203 | 0.001 |
玛拉水母科 Malagazziidae | 3 | 0.175 | 0.177 | 0.175 | 0.001 | 5 | 0.121 | 0.132 | 0.128 | 0.006 |
各目遗传距离 Intra-order | 940 | 0.105 | 0.566 | 0.199 | 0.075 | 1,847 | 0.086 | 0.775 | 0.211 | 0.096 |
花水母目 Anthoathecata | 12 | 0.178 | 0.211 | 0.204 | 0.009 | 35 | 0.222 | 0.289 | 0.260 | 0.017 |
软水母目 Leptothecata | 878 | 0.105 | 0.566 | 0.185 | 0.046 | 1,747 | 0.086 | 0.327 | 0.194 | 0.032 |
管水母目 Siphonophorae | 50 | 0.446 | 0.499 | 0.483 | 0.014 | 65 | 0.366 | 0.775 | 0.659 | 0.148 |
各亚纲遗传距离 Intra-subclass | 1,425 | 0.150 | 0.596 | 0.349 | 0.143 | 3,160 | 0.185 | 0.756 | 0.486 | 0.144 |
软水母亚纲 Hydroidolina | 1,395 | 0.150 | 0.596 | 0.348 | 0.144 | 3,154 | 0.185 | 0.672 | 0.486 | 0.144 |
硬水母亚纲 Trachylinae | 30 | 0.407 | 0.418 | 0.413 | 0.004 | 6 | 0.728 | 0.756 | 0.741 | 0.010 |
水螅虫纲遗传距离 Intra-class (Hydrozoa) | 1,027 | 0.207 | 0.597 | 0.371 | 0.076 | 554 | 0.295 | 0.898 | 0.570 | 0.170 |
Table 1 Genetic distance on different taxonomic levels
分类组别 Taxonomy group | COI | 16S | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
计数值 N | 最小值 Min | 最大值 Max | 平均值 Mean | 标准差 S.D. | 计数值 N | 最小值 Min | 最大值 Max | 平均值 Mean | 标准差 S.D. | |
种内遗传距离 Intra-species | 194 | 0.000 | 0.033 | 0.008 | 0.005 | 320 | 0.000 | 0.047 | 0.006 | 0.010 |
种间遗传距离 Inter-species | 3,992 | 0.092 | 0.597 | 0.298 | 0.128 | 6,350 | 0.068 | 0.898 | 0.394 | 0.195 |
各属遗传距离 Intra-genus | 370 | 0.092 | 0.215 | 0.171 | 0.032 | 316 | 0.068 | 0.225 | 0.157 | 0.044 |
多管水母属 Aequorea | 41 | 0.126 | 0.160 | 0.148 | 0.016 | 75 | 0.085 | 0.127 | 0.109 | 0.014 |
和平水母属 Eirene | 323 | 0.092 | 0.215 | 0.173 | 0.032 | 220 | 0.068 | 0.225 | 0.174 | 0.036 |
真瘤水母属 Eutima | 6 | 0.203 | 0.212 | 0.208 | 0.003 | 15 | 0.184 | 0.189 | 0.187 | 0.002 |
玛拉水母属 Malagazzia | - | - | - | - | - | 6 | 0.069 | 0.069 | 0.069 | 0.000 |
各科遗传距离 Intra-family | 230 | 0.127 | 0.351 | 0.189 | 0.037 | 473 | 0.111 | 0.386 | 0.258 | 0.091 |
多管水母科 Aequoreidae | 12 | 0.127 | 0.159 | 0.145 | 0.010 | 16 | 0.111 | 0.125 | 0.117 | 0.005 |
双生水母科 Diphyidae | 9 | 0.347 | 0.351 | 0.349 | 0.002 | 169 | 0.360 | 0.386 | 0.373 | 0.007 |
和平水母科 Eirenidae | 206 | 0.155 | 0.233 | 0.185 | 0.017 | 277 | 0.114 | 0.261 | 0.200 | 0.035 |
触丝水母科 Lovenellidae | - | - | - | - | - | 6 | 0.202 | 0.205 | 0.203 | 0.001 |
玛拉水母科 Malagazziidae | 3 | 0.175 | 0.177 | 0.175 | 0.001 | 5 | 0.121 | 0.132 | 0.128 | 0.006 |
各目遗传距离 Intra-order | 940 | 0.105 | 0.566 | 0.199 | 0.075 | 1,847 | 0.086 | 0.775 | 0.211 | 0.096 |
花水母目 Anthoathecata | 12 | 0.178 | 0.211 | 0.204 | 0.009 | 35 | 0.222 | 0.289 | 0.260 | 0.017 |
软水母目 Leptothecata | 878 | 0.105 | 0.566 | 0.185 | 0.046 | 1,747 | 0.086 | 0.327 | 0.194 | 0.032 |
管水母目 Siphonophorae | 50 | 0.446 | 0.499 | 0.483 | 0.014 | 65 | 0.366 | 0.775 | 0.659 | 0.148 |
各亚纲遗传距离 Intra-subclass | 1,425 | 0.150 | 0.596 | 0.349 | 0.143 | 3,160 | 0.185 | 0.756 | 0.486 | 0.144 |
软水母亚纲 Hydroidolina | 1,395 | 0.150 | 0.596 | 0.348 | 0.144 | 3,154 | 0.185 | 0.672 | 0.486 | 0.144 |
硬水母亚纲 Trachylinae | 30 | 0.407 | 0.418 | 0.413 | 0.004 | 6 | 0.728 | 0.756 | 0.741 | 0.010 |
水螅虫纲遗传距离 Intra-class (Hydrozoa) | 1,027 | 0.207 | 0.597 | 0.371 | 0.076 | 554 | 0.295 | 0.898 | 0.570 | 0.170 |
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