Biodiv Sci ›› 2009, Vol. 17 ›› Issue (3): 296-302. DOI: 10.3724/SP.J.1003.2009.09043
• Editorial • Previous Articles Next Articles
Hua Tian1,3, Ming Kang1,2, Li Li1,3, Xiaohong Yao1, Hongwen Huang1,2,*()
Received:
2009-02-23
Accepted:
2009-04-04
Online:
2009-05-20
Published:
2009-05-20
Contact:
Hongwen Huang
Hua Tian, Ming Kang, Li Li, Xiaohong Yao, Hongwen Huang. Genetic diversity in natural populations of Castanea mollissima inferred from nuclear SSR markers[J]. Biodiv Sci, 2009, 17(3): 296-302.
居群 Population | 采样数 Sample size | 经纬度 Locality | 平均等位基因数(A) | 平均有效等位基因数(AE) | 观察杂合度(HO) | 预期杂合度(HE) |
---|---|---|---|---|---|---|
华东地区 Eastern China | 142 | 7.500 | 3.802 | 0.615 | 0.685 | |
1. 江苏宜兴 Yixing, Jiangsu | 36 | 31.218°N, 119.693°E | 10.000 | 4.567 | 0.623 | 0.759 |
2. 江西婺源 Wuyuan, Jiangxi | 16 | 29.248°N, 117.866°E | 5.500 | 2.938 | 0.594 | 0.619 |
3. 浙江临安 Lin’an, Zhejiang | 29 | 30.368°N, 119.423°E | 8.375 | 4.472 | 0.596 | 0.706 |
4. 浙江兰溪 Lanxi, Zhejiang | 21 | 29.390°N, 119.406°E | 6.250 | 3.391 | 0.655 | 0.668 |
5. 安徽岩寺 Yansi, Anhui | 23 | 29.418°N, 118.293°E | 7.000 | 3.427 | 0.684 | 0.680 |
6. 安徽绩溪 Jixi, Anhui | 17 | 30.110°N, 118.835°E | 7.875 | 4.017 | 0.536 | 0.677 |
华中地区 Central China | 341 | 8.112 | 4.291 | 0.618 | 0.705 | |
7. 湖南吉首 Jishou, Hunan | 42 | 28.406°N, 109.811°E | 7.750 | 3.769 | 0.591 | 0.703 |
8. 湖南绥宁 Suining, Hunan | 26 | 26.492°N, 110.139°E | 7.375 | 3.992 | 0.595 | 0.679 |
9. 湖南永顺 Yongshun, Hunan | 10 | 28.991°N, 109.869°E | 5.000 | 3.490 | 0.589 | 0.658 |
10. 湖北神农架 Shengnongjia, Hubei | 37 | 31.448°N, 110.390°E | 8.750 | 4.517 | 0.641 | 0.713 |
11. 湖北武当山 Wudangshan, Hubei | 27 | 32.491°N, 110.309°E | 8.125 | 4.744 | 0.644 | 0.707 |
12. 湖北房县 Fangxian County, Hubei | 40 | 31.857°N, 110.740°E | 7.750 | 4.328 | 0.575 | 0.683 |
13. 湖北房县 Fangxian County, Hubei | 49 | 31.859°N, 110.643°E | 9.875 | 5.061 | 0.631 | 0.735 |
14. 湖北秭归 Zigui, Hubei | 43 | 30.747°N, 110.793°E | 10.375 | 4.406 | 0.598 | 0.721 |
15. 湖北宜昌 Yichang, Hubei | 57 | 30.769°N, 111.331°E | 10.375 | 4.627 | 0.630 | 0.737 |
16. 湖北宜昌 Yichang, Hubei | 10 | 30.751°N, 111.311°E | 5.750 | 3.979 | 0.688 | 0.709 |
西南地区 Southwestern China | 255 | 6.611 | 3.354 | 0.559 | 0.640 | |
17. 广西南丹 Nandan, Guangxi | 32 | 24.992°N, 107.615°E | 6.875 | 3.178 | 0.605 | 0.672 |
18. 贵州荔波 Libo, Guizhou | 20 | 25.411°N, 107.964°E | 6.000 | 2.980 | 0.519 | 0.631 |
19. 贵州榕江 Rongjiang, Guizhou | 31 | 25.922°N, 108.587°E | 8.125 | 3.799 | 0.598 | 0.685 |
20. 贵州紫云 Ziyun, Guizhou | 24 | 25.956°N, 106.115°E | 6.625 | 3.292 | 0.609 | 0.600 |
21. 贵州遵义 Zunyi, Guizhou | 30 | 27.756°N, 106.792°E | 6.125 | 3.279 | 0.583 | 0.600 |
22. 云南镇雄 Zhenxiong, Yunnan | 35 | 27.438°N, 104.851°E | 6.375 | 3.035 | 0.557 | 0.606 |
23. 云南麻栗坡 Malipo, Yunnan | 27 | 23.178°N, 104.858°E | 6.375 | 3.683 | 0.497 | 0.673 |
24. 四川邛崃 Qionglai, Sichuan | 21 | 30.440°N, 103.258°E | 5.875 | 3.299 | 0.548 | 0.635 |
25. 重庆城口 Chengkou, Chongqing | 35 | 32.030°N, 108.628°E | 7.125 | 3.638 | 0.518 | 0.661 |
西北地区 Northwestern China | 111 | 7.208 | 3.630 | 0.539 | 0.686 | |
26. 甘肃徽县 Huixian, Gansu | 42 | 33.970°N, 106.006°E | 7.750 | 4.050 | 0.564 | 0.707 |
27. 甘肃徽县 Huixian, Gansu | 33 | 34.358°N, 106.649°E | 7.000 | 3.221 | 0.500 | 0.659 |
28. 山西夏县 Xiaxian, Shanxi | 36 | 35.147°N, 111.442°E | 6.875 | 3.620 | 0.553 | 0.693 |
平均 Mean | 30.321 | 7.402 | 3.814 | 0.590 | 0.678 | |
合计 Total | 849 | 7.333 | 3.796 | 0.593 | 0.678 |
Table 1 Locations and indices of genetic diversity for the 28 populations of Castanea mollissima in China
居群 Population | 采样数 Sample size | 经纬度 Locality | 平均等位基因数(A) | 平均有效等位基因数(AE) | 观察杂合度(HO) | 预期杂合度(HE) |
---|---|---|---|---|---|---|
华东地区 Eastern China | 142 | 7.500 | 3.802 | 0.615 | 0.685 | |
1. 江苏宜兴 Yixing, Jiangsu | 36 | 31.218°N, 119.693°E | 10.000 | 4.567 | 0.623 | 0.759 |
2. 江西婺源 Wuyuan, Jiangxi | 16 | 29.248°N, 117.866°E | 5.500 | 2.938 | 0.594 | 0.619 |
3. 浙江临安 Lin’an, Zhejiang | 29 | 30.368°N, 119.423°E | 8.375 | 4.472 | 0.596 | 0.706 |
4. 浙江兰溪 Lanxi, Zhejiang | 21 | 29.390°N, 119.406°E | 6.250 | 3.391 | 0.655 | 0.668 |
5. 安徽岩寺 Yansi, Anhui | 23 | 29.418°N, 118.293°E | 7.000 | 3.427 | 0.684 | 0.680 |
6. 安徽绩溪 Jixi, Anhui | 17 | 30.110°N, 118.835°E | 7.875 | 4.017 | 0.536 | 0.677 |
华中地区 Central China | 341 | 8.112 | 4.291 | 0.618 | 0.705 | |
7. 湖南吉首 Jishou, Hunan | 42 | 28.406°N, 109.811°E | 7.750 | 3.769 | 0.591 | 0.703 |
8. 湖南绥宁 Suining, Hunan | 26 | 26.492°N, 110.139°E | 7.375 | 3.992 | 0.595 | 0.679 |
9. 湖南永顺 Yongshun, Hunan | 10 | 28.991°N, 109.869°E | 5.000 | 3.490 | 0.589 | 0.658 |
10. 湖北神农架 Shengnongjia, Hubei | 37 | 31.448°N, 110.390°E | 8.750 | 4.517 | 0.641 | 0.713 |
11. 湖北武当山 Wudangshan, Hubei | 27 | 32.491°N, 110.309°E | 8.125 | 4.744 | 0.644 | 0.707 |
12. 湖北房县 Fangxian County, Hubei | 40 | 31.857°N, 110.740°E | 7.750 | 4.328 | 0.575 | 0.683 |
13. 湖北房县 Fangxian County, Hubei | 49 | 31.859°N, 110.643°E | 9.875 | 5.061 | 0.631 | 0.735 |
14. 湖北秭归 Zigui, Hubei | 43 | 30.747°N, 110.793°E | 10.375 | 4.406 | 0.598 | 0.721 |
15. 湖北宜昌 Yichang, Hubei | 57 | 30.769°N, 111.331°E | 10.375 | 4.627 | 0.630 | 0.737 |
16. 湖北宜昌 Yichang, Hubei | 10 | 30.751°N, 111.311°E | 5.750 | 3.979 | 0.688 | 0.709 |
西南地区 Southwestern China | 255 | 6.611 | 3.354 | 0.559 | 0.640 | |
17. 广西南丹 Nandan, Guangxi | 32 | 24.992°N, 107.615°E | 6.875 | 3.178 | 0.605 | 0.672 |
18. 贵州荔波 Libo, Guizhou | 20 | 25.411°N, 107.964°E | 6.000 | 2.980 | 0.519 | 0.631 |
19. 贵州榕江 Rongjiang, Guizhou | 31 | 25.922°N, 108.587°E | 8.125 | 3.799 | 0.598 | 0.685 |
20. 贵州紫云 Ziyun, Guizhou | 24 | 25.956°N, 106.115°E | 6.625 | 3.292 | 0.609 | 0.600 |
21. 贵州遵义 Zunyi, Guizhou | 30 | 27.756°N, 106.792°E | 6.125 | 3.279 | 0.583 | 0.600 |
22. 云南镇雄 Zhenxiong, Yunnan | 35 | 27.438°N, 104.851°E | 6.375 | 3.035 | 0.557 | 0.606 |
23. 云南麻栗坡 Malipo, Yunnan | 27 | 23.178°N, 104.858°E | 6.375 | 3.683 | 0.497 | 0.673 |
24. 四川邛崃 Qionglai, Sichuan | 21 | 30.440°N, 103.258°E | 5.875 | 3.299 | 0.548 | 0.635 |
25. 重庆城口 Chengkou, Chongqing | 35 | 32.030°N, 108.628°E | 7.125 | 3.638 | 0.518 | 0.661 |
西北地区 Northwestern China | 111 | 7.208 | 3.630 | 0.539 | 0.686 | |
26. 甘肃徽县 Huixian, Gansu | 42 | 33.970°N, 106.006°E | 7.750 | 4.050 | 0.564 | 0.707 |
27. 甘肃徽县 Huixian, Gansu | 33 | 34.358°N, 106.649°E | 7.000 | 3.221 | 0.500 | 0.659 |
28. 山西夏县 Xiaxian, Shanxi | 36 | 35.147°N, 111.442°E | 6.875 | 3.620 | 0.553 | 0.693 |
平均 Mean | 30.321 | 7.402 | 3.814 | 0.590 | 0.678 | |
合计 Total | 849 | 7.333 | 3.796 | 0.593 | 0.678 |
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 0.327** | 0.201 | 0.201*** | 0.096 | 0.136 | 0.092 | 0.008 | 0.081 | 0.166* | 0.144 | 0.115 | 0.112 | 0.117 | 0.092 | 0.114 | 0.168* | 0.257* | 0.240** | 0.149 | 0.262 | 0.338** | 0.093 | 0.161 | 0.222 | 0.221* | 0.263* | 0.173 | |
2 | 0.103*** | 0.208* | 0.568*** | 0.463** | 0.257 | 0.272** | 0.326** | 0.342* | 0.185 | 0.203 | 0.154 | 0.135 | 0.191 | 0.190* | 0.107 | 0.164* | 0.111 | 0.314** | 0.380* | 0.501* | 0.395** | 0.242* | 0.193 | 0.107 | 0.263 | 0.367* | 0.306 | |
3 | 0.117*** | 0.103*** | 0.553*** | 0.394** | 0.047 | 0.189* | 0.254** | 0.317** | 0.047 | 0.261** | 0.145 | 0.101 | 0.174 | 0.071 | 0.128 | 0.121 | 0.095 | 0.260 | 0.120 | 0.242 | 0.156 | 0.141 | 0.168 | 0.196 | 0.360*** | 0.456*** | 0.361** | |
4 | 0.052* | 0.130*** | 0.140*** | 0.088 | 0.492*** | 0.239*** | 0.165 | 0.174 | 0.453*** | 0.233 | 0.320** | 0.302** | 0.241** | 0.310*** | 0.374** | 0.452*** | 0.549*** | 0.401** | 0.502*** | 0.604*** | 0.684*** | 0.329** | 0.452** | 0.473*** | 0.300** | 0.175 | 0.093 | |
5 | 0.081*** | 0.120*** | 0.165*** | 0.094*** | 0.289* | 0.079 | 0.097 | 0.050 | 0.273** | 0.160 | 0.195* | 0.181 | 0.123 | 0.165 | 0.219 | 0.280* | 0.381* | 0.215 | 0.311 | 0.427 | 0.571*** | 0.140 | 0.293* | 0.344* | 0.269* | 0.222* | 0.125 | |
6 | 0.089*** | 0.088*** | 0.079*** | 0.114*** | 0.110*** | 0.113 | 0.194 | 0.226* | 0.007 | 0.201** | 0.100* | 0.081* | 0.121* | 0.050 | 0.084 | 0.081 | 0.083 | 0.150 | 0.059 | 0.182 | 0.265 | 0.054 | 0.111 | 0.184 | 0.310*** | 0.396*** | 0.310** | |
7 | 0.102*** | 0.121*** | 0.114*** | 0.109*** | 0.102*** | 0.094*** | 0.088 | 0.007 | 0.098 | 0.114 | 0.097 | 0.058 | 0.014 | 0.033 | 0.047 | 0.095 | 0.145 | 0.130 | 0.162 | 0.303 | 0.376** | 0.022 | 0.153 | 0.194 | 0.242* | 0.252* | 0.163 | |
8 | 0.077*** | 0.118*** | 0.132*** | 0.140*** | 0.127*** | 0.107*** | 0.086*** | 0.061 | 0.205** | 0.111 | 0.109 | 0.105 | 0.099 | 0.106 | 0.105 | 0.174* | 0.280* | 0.266 | 0.228 | 0.365* | 0.412*** | 0.102 | 0.172 | 0.218 | 0.181 | 0.216 | 0.122 | |
9 | 0.122*** | 0.153** | 0.140*** | 0.153*** | 0.123*** | 0.109** | 0.016** | 0.094*** | 0.176** | 0.085 | 0.122 | 0.072 | 0.006 | 0.061 | 0.070 | 0.185* | 0.261** | 0.201 | 0.265 | 0.424 | 0.535** | 0.074 | 0.229* | 0.253* | 0.211* | 0.163 | 0.080 | |
10 | 0.082*** | 0.085*** | 0.099*** | 0.125*** | 0.085*** | 0.064*** | 0.069*** | 0.090*** | 0.049*** | 0.188 | 0.099 | 0.068 | 0.090 | 0.035 | 0.049 | 0.043 | 0.039 | 0.156 | 0.080 | 0.207 | 0.255* | 0.053 | 0.120* | 0.173 | 0.292*** | 0.370** | 0.293* | |
11 | 0.137*** | 0.108*** | 0.122*** | 0.157*** | 0.114*** | 0.083*** | 0.101*** | 0.138*** | 0.117*** | 0.101*** | 0.022 | 0.042 | 0.066 | 0.122 | 0.051 | 0.123 | 0.212 | 0.135 | 0.330 | 0.442* | 0.433** | 0.095 | 0.080 | 0.079 | 0.028 | 0.100 | 0.051 | |
12 | 0.108*** | 0.081*** | 0.098*** | 0.137*** | 0.102*** | 0.032*** | 0.088*** | 0.097*** | 0.091** | 0.068*** | 0.030*** | 0.011 | 0.071 | 0.069 | 0.015 | 0.036 | 0.122 | 0.097 | 0.241 | 0.351* | 0.329* | 0.034 | 0.003 | 0.025 | 0.100 | 0.226** | 0.143 | |
13 | 0.103*** | 0.075*** | 0.086*** | 0.118*** | 0.103*** | 0.029** | 0.062*** | 0.101*** | 0.067*** | 0.056*** | 0.032*** | 0.017*** | 0.024 | 0.020 | 0.004 | 0.039 | 0.087 | 0.118 | 0.195 | 0.322* | 0.260 | 0.033 | 0.054 | 0.066 | 0.139* | 0.219** | 0.144 | |
14 | 0.071*** | 0.080*** | 0.102*** | 0.073*** | 0.121*** | 0.067*** | 0.091*** | 0.104*** | 0.099*** | 0.070*** | 0.103*** | 0.078*** | 0.065*** | 0.027 | 0.011 | 0.080 | 0.117 | 0.146 | 0.198 | 0.341* | 0.341*** | 0.047 | 0.136** | 0.158 | 0.172** | 0.179 | 0.118 | |
15 | 0.073*** | 0.071*** | 0.077*** | 0.077*** | 0.111*** | 0.039*** | 0.079*** | 0.094*** | 0.094*** | 0.061*** | 0.074*** | 0.046*** | 0.031*** | 0.029*** | 0.028 | 0.051 | 0.085 | 0.148 | 0.108 | 0.249 | 0.236* | 0.027 | 0.119 | 0.159 | 0.236** | 0.285** | 0.199* | |
16 | 0.082*** | 0.099*** | 0.113*** | 0.144*** | 0.112*** | 0.102** | 0.029 | 0.060** | 0.021 | 0.056*** | 0.117*** | 0.094** | 0.077*** | 0.097*** | 0.095*** | 0.012 | 0.045 | 0.146 | 0.205 | 0.356 | 0.372** | 0.022 | 0.040 | 0.053 | 0.153 | 0.236* | 0.155 | |
17 | 0.095*** | 0.068*** | 0.102*** | 0.121*** | 0.097*** | 0.075*** | 0.083*** | 0.116*** | 0.076*** | 0.060*** | 0.091*** | 0.067*** | 0.057*** | 0.100*** | 0.071*** | 0.082*** | 0.063 | 0.157 | 0.211 | 0.357 | 0.387** | 0.024 | 0.056 | 0.096 | 0.225* | 0.339* | 0.243 | |
18 | 0.138*** | 0.110*** | 0.141*** | 0.165*** | 0.128*** | 0.102*** | 0.080*** | 0.123*** | 0.084*** | 0.037* | 0.117*** | 0.094*** | 0.076*** | 0.088*** | 0.089*** | 0.082*** | 0.084*** | 0.193 | 0.210 | 0.360 | 0.340* | 0.106 | 0.144 | 0.144 | 0.326*** | 0.406** | 0.326* | |
19 | 0.070*** | 0.152*** | 0.179*** | 0.105*** | 0.108*** | 0.158*** | 0.131*** | 0.174*** | 0.149*** | 0.117*** | 0.162*** | 0.156*** | 0.137*** | 0.101*** | 0.113*** | 0.143*** | 0.120*** | 0.165*** | 0.288 | 0.380 | 0.457** | 0.079 | 0.120 | 0.185 | 0.267 | 0.329* | 0.258* | |
20 | 0.165*** | 0.172*** | 0.140*** | 0.195*** | 0.202*** | 0.108*** | 0.169*** | 0.151*** | 0.181*** | 0.151*** | 0.199*** | 0.162*** | 0.138*** | 0.148*** | 0.112*** | 0.178*** | 0.191*** | 0.187*** | 0.241*** | 0.071 | 0.290* | 0.155 | 0.275 | 0.346* | 0.430** | 0.478* | 0.389* | |
21 | 0.172*** | 0.212*** | 0.174*** | 0.226*** | 0.235*** | 0.156*** | 0.205*** | 0.181*** | 0.243*** | 0.180*** | 0.234*** | 0.196*** | 0.176*** | 0.183*** | 0.161*** | 0.190*** | 0.223*** | 0.230*** | 0.246*** | 0.135*** | 0.409* | 0.299 | 0.381 | 0.454** | 0.520*** | 0.572** | 0.489** | |
22 | 0.178*** | 0.193*** | 0.152*** | 0.219*** | 0.238*** | 0.165*** | 0.172*** | 0.155*** | 0.217*** | 0.161*** | 0.224*** | 0.200*** | 0.170*** | 0.154*** | 0.144*** | 0.175*** | 0.201*** | 0.186*** | 0.255*** | 0.161*** | 0.217*** | 0.379*** | 0.392*** | 0.374* | 0.497*** | 0.576** | 0.510** | |
23 | 0.099*** | 0.097*** | 0.128*** | 0.114*** | 0.079*** | 0.072*** | 0.074*** | 0.106*** | 0.065*** | 0.058*** | 0.071*** | 0.052*** | 0.050*** | 0.089*** | 0.059*** | 0.073*** | 0.039*** | 0.093*** | 0.139*** | 0.184*** | 0.225*** | 0.188*** | 0.063 | 0.128 | 0.222* | 0.295* | 0.195 | |
24 | 0.113*** | 0.098*** | 0.117*** | 0.146*** | 0.104*** | 0.080** | 0.103*** | 0.110*** | 0.105** | 0.055* | 0.098*** | 0.071** | 0.081*** | 0.073*** | 0.083*** | 0.091** | 0.061*** | 0.050** | 0.158*** | 0.202*** | 0.237*** | 0.192*** | 0.071*** | 0.009 | 0.166 | 0.325 | 0.234 | |
25 | 0.134** | 0.130*** | 0.167*** | 0.158*** | 0.082*** | 0.136*** | 0.138*** | 0.158** | 0.170** | 0.118*** | 0.128*** | 0.118*** | 0.120*** | 0.129*** | 0.133*** | 0.133** | 0.149*** | 0.137*** | 0.157*** | 0.215*** | 0.236*** | 0.242*** | 0.141*** | 0.106** | 0.145 | 0.301* | 0.235* | |
26 | 0.114*** | 0.088*** | 0.134*** | 0.140*** | 0.103*** | 0.091*** | 0.128*** | 0.120*** | 0.120*** | 0.082*** | 0.052*** | 0.058*** | 0.065*** | 0.087*** | 0.084*** | 0.100*** | 0.088*** | 0.095*** | 0.151*** | 0.187*** | 0.214*** | 0.212*** | 0.082*** | 0.063*** | 0.117*** | 0.090 | 0.076 | |
27 | 0.137*** | 0.137*** | 0.167*** | 0.157*** | 0.090*** | 0.123*** | 0.128*** | 0.170*** | 0.131*** | 0.113*** | 0.076*** | 0.093*** | 0.086*** | 0.130*** | 0.120*** | 0.134*** | 0.111*** | 0.147*** | 0.150*** | 0.238*** | 0.256*** | 0.278*** | 0.123*** | 0.143*** | 0.146*** | 0.071*** | 0.023 | |
28 | 0.089*** | 0.129*** | 0.167*** | 0.126*** | 0.081*** | 0.114*** | 0.138*** | 0.132*** | 0.168*** | 0.110*** | 0.109*** | 0.108*** | 0.104*** | 0.118*** | 0.113*** | 0.132*** | 0.133*** | 0.157*** | 0.114*** | 0.195*** | 0.207*** | 0.248*** | 0.135*** | 0.150*** | 0.100*** | 0.105*** | 0.090*** |
Table 2 Estimated pairwise FST (below diagonal) and RST (above diagonal) values for Castanea mollissimapopulations. Population codes see Table 1.
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 0.327** | 0.201 | 0.201*** | 0.096 | 0.136 | 0.092 | 0.008 | 0.081 | 0.166* | 0.144 | 0.115 | 0.112 | 0.117 | 0.092 | 0.114 | 0.168* | 0.257* | 0.240** | 0.149 | 0.262 | 0.338** | 0.093 | 0.161 | 0.222 | 0.221* | 0.263* | 0.173 | |
2 | 0.103*** | 0.208* | 0.568*** | 0.463** | 0.257 | 0.272** | 0.326** | 0.342* | 0.185 | 0.203 | 0.154 | 0.135 | 0.191 | 0.190* | 0.107 | 0.164* | 0.111 | 0.314** | 0.380* | 0.501* | 0.395** | 0.242* | 0.193 | 0.107 | 0.263 | 0.367* | 0.306 | |
3 | 0.117*** | 0.103*** | 0.553*** | 0.394** | 0.047 | 0.189* | 0.254** | 0.317** | 0.047 | 0.261** | 0.145 | 0.101 | 0.174 | 0.071 | 0.128 | 0.121 | 0.095 | 0.260 | 0.120 | 0.242 | 0.156 | 0.141 | 0.168 | 0.196 | 0.360*** | 0.456*** | 0.361** | |
4 | 0.052* | 0.130*** | 0.140*** | 0.088 | 0.492*** | 0.239*** | 0.165 | 0.174 | 0.453*** | 0.233 | 0.320** | 0.302** | 0.241** | 0.310*** | 0.374** | 0.452*** | 0.549*** | 0.401** | 0.502*** | 0.604*** | 0.684*** | 0.329** | 0.452** | 0.473*** | 0.300** | 0.175 | 0.093 | |
5 | 0.081*** | 0.120*** | 0.165*** | 0.094*** | 0.289* | 0.079 | 0.097 | 0.050 | 0.273** | 0.160 | 0.195* | 0.181 | 0.123 | 0.165 | 0.219 | 0.280* | 0.381* | 0.215 | 0.311 | 0.427 | 0.571*** | 0.140 | 0.293* | 0.344* | 0.269* | 0.222* | 0.125 | |
6 | 0.089*** | 0.088*** | 0.079*** | 0.114*** | 0.110*** | 0.113 | 0.194 | 0.226* | 0.007 | 0.201** | 0.100* | 0.081* | 0.121* | 0.050 | 0.084 | 0.081 | 0.083 | 0.150 | 0.059 | 0.182 | 0.265 | 0.054 | 0.111 | 0.184 | 0.310*** | 0.396*** | 0.310** | |
7 | 0.102*** | 0.121*** | 0.114*** | 0.109*** | 0.102*** | 0.094*** | 0.088 | 0.007 | 0.098 | 0.114 | 0.097 | 0.058 | 0.014 | 0.033 | 0.047 | 0.095 | 0.145 | 0.130 | 0.162 | 0.303 | 0.376** | 0.022 | 0.153 | 0.194 | 0.242* | 0.252* | 0.163 | |
8 | 0.077*** | 0.118*** | 0.132*** | 0.140*** | 0.127*** | 0.107*** | 0.086*** | 0.061 | 0.205** | 0.111 | 0.109 | 0.105 | 0.099 | 0.106 | 0.105 | 0.174* | 0.280* | 0.266 | 0.228 | 0.365* | 0.412*** | 0.102 | 0.172 | 0.218 | 0.181 | 0.216 | 0.122 | |
9 | 0.122*** | 0.153** | 0.140*** | 0.153*** | 0.123*** | 0.109** | 0.016** | 0.094*** | 0.176** | 0.085 | 0.122 | 0.072 | 0.006 | 0.061 | 0.070 | 0.185* | 0.261** | 0.201 | 0.265 | 0.424 | 0.535** | 0.074 | 0.229* | 0.253* | 0.211* | 0.163 | 0.080 | |
10 | 0.082*** | 0.085*** | 0.099*** | 0.125*** | 0.085*** | 0.064*** | 0.069*** | 0.090*** | 0.049*** | 0.188 | 0.099 | 0.068 | 0.090 | 0.035 | 0.049 | 0.043 | 0.039 | 0.156 | 0.080 | 0.207 | 0.255* | 0.053 | 0.120* | 0.173 | 0.292*** | 0.370** | 0.293* | |
11 | 0.137*** | 0.108*** | 0.122*** | 0.157*** | 0.114*** | 0.083*** | 0.101*** | 0.138*** | 0.117*** | 0.101*** | 0.022 | 0.042 | 0.066 | 0.122 | 0.051 | 0.123 | 0.212 | 0.135 | 0.330 | 0.442* | 0.433** | 0.095 | 0.080 | 0.079 | 0.028 | 0.100 | 0.051 | |
12 | 0.108*** | 0.081*** | 0.098*** | 0.137*** | 0.102*** | 0.032*** | 0.088*** | 0.097*** | 0.091** | 0.068*** | 0.030*** | 0.011 | 0.071 | 0.069 | 0.015 | 0.036 | 0.122 | 0.097 | 0.241 | 0.351* | 0.329* | 0.034 | 0.003 | 0.025 | 0.100 | 0.226** | 0.143 | |
13 | 0.103*** | 0.075*** | 0.086*** | 0.118*** | 0.103*** | 0.029** | 0.062*** | 0.101*** | 0.067*** | 0.056*** | 0.032*** | 0.017*** | 0.024 | 0.020 | 0.004 | 0.039 | 0.087 | 0.118 | 0.195 | 0.322* | 0.260 | 0.033 | 0.054 | 0.066 | 0.139* | 0.219** | 0.144 | |
14 | 0.071*** | 0.080*** | 0.102*** | 0.073*** | 0.121*** | 0.067*** | 0.091*** | 0.104*** | 0.099*** | 0.070*** | 0.103*** | 0.078*** | 0.065*** | 0.027 | 0.011 | 0.080 | 0.117 | 0.146 | 0.198 | 0.341* | 0.341*** | 0.047 | 0.136** | 0.158 | 0.172** | 0.179 | 0.118 | |
15 | 0.073*** | 0.071*** | 0.077*** | 0.077*** | 0.111*** | 0.039*** | 0.079*** | 0.094*** | 0.094*** | 0.061*** | 0.074*** | 0.046*** | 0.031*** | 0.029*** | 0.028 | 0.051 | 0.085 | 0.148 | 0.108 | 0.249 | 0.236* | 0.027 | 0.119 | 0.159 | 0.236** | 0.285** | 0.199* | |
16 | 0.082*** | 0.099*** | 0.113*** | 0.144*** | 0.112*** | 0.102** | 0.029 | 0.060** | 0.021 | 0.056*** | 0.117*** | 0.094** | 0.077*** | 0.097*** | 0.095*** | 0.012 | 0.045 | 0.146 | 0.205 | 0.356 | 0.372** | 0.022 | 0.040 | 0.053 | 0.153 | 0.236* | 0.155 | |
17 | 0.095*** | 0.068*** | 0.102*** | 0.121*** | 0.097*** | 0.075*** | 0.083*** | 0.116*** | 0.076*** | 0.060*** | 0.091*** | 0.067*** | 0.057*** | 0.100*** | 0.071*** | 0.082*** | 0.063 | 0.157 | 0.211 | 0.357 | 0.387** | 0.024 | 0.056 | 0.096 | 0.225* | 0.339* | 0.243 | |
18 | 0.138*** | 0.110*** | 0.141*** | 0.165*** | 0.128*** | 0.102*** | 0.080*** | 0.123*** | 0.084*** | 0.037* | 0.117*** | 0.094*** | 0.076*** | 0.088*** | 0.089*** | 0.082*** | 0.084*** | 0.193 | 0.210 | 0.360 | 0.340* | 0.106 | 0.144 | 0.144 | 0.326*** | 0.406** | 0.326* | |
19 | 0.070*** | 0.152*** | 0.179*** | 0.105*** | 0.108*** | 0.158*** | 0.131*** | 0.174*** | 0.149*** | 0.117*** | 0.162*** | 0.156*** | 0.137*** | 0.101*** | 0.113*** | 0.143*** | 0.120*** | 0.165*** | 0.288 | 0.380 | 0.457** | 0.079 | 0.120 | 0.185 | 0.267 | 0.329* | 0.258* | |
20 | 0.165*** | 0.172*** | 0.140*** | 0.195*** | 0.202*** | 0.108*** | 0.169*** | 0.151*** | 0.181*** | 0.151*** | 0.199*** | 0.162*** | 0.138*** | 0.148*** | 0.112*** | 0.178*** | 0.191*** | 0.187*** | 0.241*** | 0.071 | 0.290* | 0.155 | 0.275 | 0.346* | 0.430** | 0.478* | 0.389* | |
21 | 0.172*** | 0.212*** | 0.174*** | 0.226*** | 0.235*** | 0.156*** | 0.205*** | 0.181*** | 0.243*** | 0.180*** | 0.234*** | 0.196*** | 0.176*** | 0.183*** | 0.161*** | 0.190*** | 0.223*** | 0.230*** | 0.246*** | 0.135*** | 0.409* | 0.299 | 0.381 | 0.454** | 0.520*** | 0.572** | 0.489** | |
22 | 0.178*** | 0.193*** | 0.152*** | 0.219*** | 0.238*** | 0.165*** | 0.172*** | 0.155*** | 0.217*** | 0.161*** | 0.224*** | 0.200*** | 0.170*** | 0.154*** | 0.144*** | 0.175*** | 0.201*** | 0.186*** | 0.255*** | 0.161*** | 0.217*** | 0.379*** | 0.392*** | 0.374* | 0.497*** | 0.576** | 0.510** | |
23 | 0.099*** | 0.097*** | 0.128*** | 0.114*** | 0.079*** | 0.072*** | 0.074*** | 0.106*** | 0.065*** | 0.058*** | 0.071*** | 0.052*** | 0.050*** | 0.089*** | 0.059*** | 0.073*** | 0.039*** | 0.093*** | 0.139*** | 0.184*** | 0.225*** | 0.188*** | 0.063 | 0.128 | 0.222* | 0.295* | 0.195 | |
24 | 0.113*** | 0.098*** | 0.117*** | 0.146*** | 0.104*** | 0.080** | 0.103*** | 0.110*** | 0.105** | 0.055* | 0.098*** | 0.071** | 0.081*** | 0.073*** | 0.083*** | 0.091** | 0.061*** | 0.050** | 0.158*** | 0.202*** | 0.237*** | 0.192*** | 0.071*** | 0.009 | 0.166 | 0.325 | 0.234 | |
25 | 0.134** | 0.130*** | 0.167*** | 0.158*** | 0.082*** | 0.136*** | 0.138*** | 0.158** | 0.170** | 0.118*** | 0.128*** | 0.118*** | 0.120*** | 0.129*** | 0.133*** | 0.133** | 0.149*** | 0.137*** | 0.157*** | 0.215*** | 0.236*** | 0.242*** | 0.141*** | 0.106** | 0.145 | 0.301* | 0.235* | |
26 | 0.114*** | 0.088*** | 0.134*** | 0.140*** | 0.103*** | 0.091*** | 0.128*** | 0.120*** | 0.120*** | 0.082*** | 0.052*** | 0.058*** | 0.065*** | 0.087*** | 0.084*** | 0.100*** | 0.088*** | 0.095*** | 0.151*** | 0.187*** | 0.214*** | 0.212*** | 0.082*** | 0.063*** | 0.117*** | 0.090 | 0.076 | |
27 | 0.137*** | 0.137*** | 0.167*** | 0.157*** | 0.090*** | 0.123*** | 0.128*** | 0.170*** | 0.131*** | 0.113*** | 0.076*** | 0.093*** | 0.086*** | 0.130*** | 0.120*** | 0.134*** | 0.111*** | 0.147*** | 0.150*** | 0.238*** | 0.256*** | 0.278*** | 0.123*** | 0.143*** | 0.146*** | 0.071*** | 0.023 | |
28 | 0.089*** | 0.129*** | 0.167*** | 0.126*** | 0.081*** | 0.114*** | 0.138*** | 0.132*** | 0.168*** | 0.110*** | 0.109*** | 0.108*** | 0.104*** | 0.118*** | 0.113*** | 0.132*** | 0.133*** | 0.157*** | 0.114*** | 0.195*** | 0.207*** | 0.248*** | 0.135*** | 0.150*** | 0.100*** | 0.105*** | 0.090*** |
变异来源 Source of variation | 自由度 d.f. | 离差平方和(SSD) Sum of squares | 方差分量 Variance components | 方差分量比例 Percentage of variation(%) | P-value |
---|---|---|---|---|---|
地区间 Among regions | 3 | 100.241 | 0.03734 | 1.68 | P = 0.00196 |
地区内居群间 Among populations within regions | 24 | 408.499 | 0.24851 | 11.16 | P<0.001 |
居群内个体间 Within populations | 1,670 | 3,233.717 | 1.93636 | 87.16 | P<0.001 |
Table 3 Analysis of molecular variance (AMOVA) of genetic diversity for Castanea mollissima populations
变异来源 Source of variation | 自由度 d.f. | 离差平方和(SSD) Sum of squares | 方差分量 Variance components | 方差分量比例 Percentage of variation(%) | P-value |
---|---|---|---|---|---|
地区间 Among regions | 3 | 100.241 | 0.03734 | 1.68 | P = 0.00196 |
地区内居群间 Among populations within regions | 24 | 408.499 | 0.24851 | 11.16 | P<0.001 |
居群内个体间 Within populations | 1,670 | 3,233.717 | 1.93636 | 87.16 | P<0.001 |
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