三种蚜虫的线粒体基因组数据

doi:10.17520/biods.2022204

摘要/Abstract

https://www.biodiversity-science.net/fileup/1005-0094/DATA/2022204.zip

Abstract

The complete mitochondrial genomes (mitogenomes) have been widely used in the studies of molecular evolution, genomics and phylogeny. Aphids are important agricultural and forestry pests. Considering the reported complete mitogenomes of aphids are still limited, it will be of great value to obtain more aphid mitogenome data for related researches. This paper reports the complete mitogenome sequences of three aphid species, Greenidea ficicola, Aphis aurantii and Mindarus keteleerifoliae. The data of their detailed annotation, their gene sequence and gene structure, and the codon usage are also presented. These data can benefit future researches such as insect phylogenetic relationships, population divergence patterns as well as insect pest control.

10.17520/biods.2022204.T0002

Database/Dataset Profile

Title	Mitochondrial genome data of three aphid species
Authors	Congcong Lu, Qian Liu, Xiaolei Huang
Corresponding author	Xiaolei Huang (huangxl@fafu.edu.cn)
Time range	2015-2017
Geographical scope	Quanzhou (Fujian), Fuzhou (Fujian)
File size	48 MB
Data format	.fasta, .xlsx, *.tif
Data link	http://www.dataopen.info/home/datafile/index/id/252 http://doi.org/10.24899/do.202204004 https://www.biodiversity-science.net/fileup/1005-0094/DATA/2022204.zip
Database/Dataset composition	The dataset consists of 7 data files in total, containing 3 sequence files, with a data volume of 50 KB; one excel data files, with a data volume of 37 KB; and 3 picture files, with a data volume of 47.4 MB.

Key words: aphids, mitochondrial genome, gene annotation, genomic data

卢聪聪, 刘倩, 黄晓磊 (2022) 三种蚜虫的线粒体基因组数据. 生物多样性, 30, 22204. DOI: 10.17520/biods.2022204.

Congcong Lu, Qian Liu, Xiaolei Huang (2022) Mitochondrial genome data of three aphid species. Biodiversity Science, 30, 22204. DOI: 10.17520/biods.2022204.

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链接本文: https://www.biodiversity-science.net/CN/10.17520/biods.2022204

https://www.biodiversity-science.net/CN/Y2022/V30/I7/22204

图/表 3

参考文献 23

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亚科 Subfamily	属数 Number of genera	物种数 Number of species	线粒体基因组 Number of mitogenomes	具有线粒体基因组的物种 Number of species with mitogenome
短痣蚜亚科 Anoeciinae	4	32	-	-
蚜亚科 Aphidinae	283	3,156	59	25
波罗的毛蚜亚科 Baltichaitophorinae	2	2	-	-
长角斑蚜亚科 Calaphidinae	76	424	2	2
毛蚜亚科 Chaitophorinae	13	181	1	1
镰管蚜亚科 Drepanosiphinae	13	60	-	-
绵蚜亚科 Eriosomatinae	65	402	39	18
毛管蚜亚科 Greenideinae	18	189	11	6
扁蚜亚科 Hormaphidinae	47	236	14	6
以斑蚜亚科 Israelaphidinae	1	4	-	-
大蚜亚科 Lachninae	19	420	5	3
蜥蜴斑蚜亚科 Lizeriinae	5	44	-	-
粗腿蚜亚科 Macropodaphidinae	1	7	-	-
纩蚜亚科 Mindarinae	2	18	1	1
新叶蚜亚科 Neophyllaphidinae	3	21	-	-
平翅绵蚜亚科 Phloeomyzinae	5	5	-	-
叶蚜亚科 Phyllaphidinae	11	28	-	-
翅斑蚜亚科 Pterastheniinae	2	5	-	-
针蚜亚科 Spicaphidinae	2	16	-	-
台斑蚜亚科 Taiwanaphidinae	1	14	-	-
塔叶蚜亚科 Tamaliinae	1	6	-	-
群蚜亚科 Thelaxinae	6	21	-	-
总计 Total	580	5,291	132	62

亚科 Subfamily	属数 Number of genera	物种数 Number of species	线粒体基因组 Number of mitogenomes	具有线粒体基因组的物种 Number of species with mitogenome
短痣蚜亚科 Anoeciinae	4	32	-	-
蚜亚科 Aphidinae	283	3,156	59	25
波罗的毛蚜亚科 Baltichaitophorinae	2	2	-	-
长角斑蚜亚科 Calaphidinae	76	424	2	2
毛蚜亚科 Chaitophorinae	13	181	1	1
镰管蚜亚科 Drepanosiphinae	13	60	-	-
绵蚜亚科 Eriosomatinae	65	402	39	18
毛管蚜亚科 Greenideinae	18	189	11	6
扁蚜亚科 Hormaphidinae	47	236	14	6
以斑蚜亚科 Israelaphidinae	1	4	-	-
大蚜亚科 Lachninae	19	420	5	3
蜥蜴斑蚜亚科 Lizeriinae	5	44	-	-
粗腿蚜亚科 Macropodaphidinae	1	7	-	-
纩蚜亚科 Mindarinae	2	18	1	1
新叶蚜亚科 Neophyllaphidinae	3	21	-	-
平翅绵蚜亚科 Phloeomyzinae	5	5	-	-
叶蚜亚科 Phyllaphidinae	11	28	-	-
翅斑蚜亚科 Pterastheniinae	2	5	-	-
针蚜亚科 Spicaphidinae	2	16	-	-
台斑蚜亚科 Taiwanaphidinae	1	14	-	-
塔叶蚜亚科 Tamaliinae	1	6	-	-
群蚜亚科 Thelaxinae	6	21	-	-
总计 Total	580	5,291	132	62

物种 Species	样品编号 Sample number	亚科 Subfamily	采集时间 Date of collection	采集地点 Locality of collection	寄主植物 Host plant
榕毛管蚜 Greenidea ficicola	20150502-4	毛管蚜亚科 Greenideinae	2015/05/02	福建泉州 Quanzhou, Fujian	高山榕 Ficus altissima
橘二叉蚜 Aphis aurantii	20160327-4	蚜亚科 Aphidinae	2016/03/27	福建福州 Fuzhou, Fujian	山茶 Camellia japonica
油杉纩蚜 Mindarus keteleerifoliae	20170609-6	纩蚜亚科 Mindarinae	2017/06/09	福建福州 Fuzhou, Fujian	油杉 Keteleeria fortunei

物种 Species	样品编号 Sample number	亚科 Subfamily	采集时间 Date of collection	采集地点 Locality of collection	寄主植物 Host plant
榕毛管蚜 Greenidea ficicola	20150502-4	毛管蚜亚科 Greenideinae	2015/05/02	福建泉州 Quanzhou, Fujian	高山榕 Ficus altissima
橘二叉蚜 Aphis aurantii	20160327-4	蚜亚科 Aphidinae	2016/03/27	福建福州 Fuzhou, Fujian	山茶 Camellia japonica
油杉纩蚜 Mindarus keteleerifoliae	20170609-6	纩蚜亚科 Mindarinae	2017/06/09	福建福州 Fuzhou, Fujian	油杉 Keteleeria fortunei