生物多样性 ›› 2022, Vol. 30 ›› Issue (7): 22204.  DOI: 10.17520/biods.2022204

• 数据论文 • 上一篇    下一篇

三种蚜虫的线粒体基因组数据

卢聪聪, 刘倩, 黄晓磊()   

  1. 闽台作物有害生物生态防控国家重点实验室, 福建农林大学植物保护学院, 福州 350002
  • 收稿日期:2022-04-20 接受日期:2022-06-13 出版日期:2022-07-20 发布日期:2022-06-24
  • 通讯作者: 黄晓磊
  • 作者简介:*E-mail: huangxl@fafu.edu.cn
  • 基金资助:
    国家自然科学基金(31970446)

Mitochondrial genome data of three aphid species

Congcong Lu, Qian Liu, Xiaolei Huang()   

  1. State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, College of Plant Protection, Fujian Agriculture and Forestry University, Fuzhou 350002
  • Received:2022-04-20 Accepted:2022-06-13 Online:2022-07-20 Published:2022-06-24
  • Contact: Xiaolei Huang

摘要:

完整的线粒体基因组已被广泛应用于分子进化、基因组学、系统发育等方面的研究。蚜虫是一类重要的农林业害虫, 但目前公开报道的蚜虫完整线粒体基因组非常有限, 因此获得更多的基因组数据对相关研究具有重要价值。本文报道了榕毛管蚜(Greenidea ficicola)、橘二叉蚜(Aphis aurantia)和油杉纩蚜(Mindarus keteleerifoliae) 3种蚜虫的完整线粒体基因组的序列、详细注释信息、基因结构图、密码子使用情况等。该数据集可为昆虫系统发育关系、种群分化格局、害虫防治等方面的工作提供帮助。

数据库(集)基本信息简介

数据库(集)名称 三种蚜虫的线粒体基因组数据
作者 卢聪聪, 刘倩, 黄晓磊
通讯作者 黄晓磊(huangxl@fafu.edu.cn)
时间范围 2015-2017年
地理区域 福建福州、泉州
文件大小 48 MB
数据格式 *.fasta, *.xlsx, *.tif
数据链接 http://www.dataopen.info/home/datafile/index/id/252
http://doi.org/10.24899/do.202204004
https://www.biodiversity-science.net/CN/10.17520/biods.2022204
数据库(集)组成 数据集共由7个文件组成, 包含: 3个序列数据文件, 数据量50 KB; 1个excel数据文件, 数据量37 KB; 3个图片数据, 数据量47.4 MB。

https://www.biodiversity-science.net/fileup/1005-0094/DATA/2022204.zip

关键词: 蚜虫, 线粒体基因组, 基因注释, 基因组数据

Abstract

The complete mitochondrial genomes (mitogenomes) have been widely used in the studies of molecular evolution, genomics and phylogeny. Aphids are important agricultural and forestry pests. Considering the reported complete mitogenomes of aphids are still limited, it will be of great value to obtain more aphid mitogenome data for related researches. This paper reports the complete mitogenome sequences of three aphid species, Greenidea ficicola, Aphis aurantii and Mindarus keteleerifoliae. The data of their detailed annotation, their gene sequence and gene structure, and the codon usage are also presented. These data can benefit future researches such as insect phylogenetic relationships, population divergence patterns as well as insect pest control.

10.17520/biods.2022204.T0002

Database/Dataset Profile

Title Mitochondrial genome data of three aphid species
Authors Congcong Lu, Qian Liu, Xiaolei Huang
Corresponding author Xiaolei Huang (huangxl@fafu.edu.cn)
Time range 2015-2017
Geographical scope Quanzhou (Fujian), Fuzhou (Fujian)
File size 48 MB
Data format *.fasta, *.xlsx, *.tif
Data link http://www.dataopen.info/home/datafile/index/id/252
http://doi.org/10.24899/do.202204004
https://www.biodiversity-science.net/CN/10.17520/biods.2022204
Database/Dataset composition The dataset consists of 7 data files in total, containing 3 sequence files, with a data volume of 50 KB; one excel data files, with a data volume of 37 KB; and 3 picture files, with a data volume of 47.4 MB.

Key words: aphids, mitochondrial genome, gene annotation, genomic data