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[an error occurred while processing this directive]细胞核和有性生殖是如何起源的?
How did nucleus and sexual reproduction come into being?
Received date: 2016-02-28
Accepted date: 2016-07-12
Online published: 2016-09-02
真核生物的起源是一个根本性的、令人生畏的进化谜题, 目前设想的关于“核”起源的流行情景还远谈不上清晰。关于真核生物的起源可谓众说纷纭, 有共营模型、自演化模型、病毒性真核生物起源模型和外膜假说, 等等。迄今为止, 真核演化的动因则鲜有涉及。笔者发现, 从原核生物到真核生物, 基因组的DNA总量大约增加了3.5个数量级, 而这与现代真核生物的DNA压缩比(packing ratio)惊人地一致! 这样, 仅仅用偶然的吞噬、共生或寄生来解释真核生物的起源, 无论如何是难以让人信服的(其实, 正是内共生理论将人们引入了歧途), 而关键是需要解释基因组为何急剧增大。这可能与DNA的复制错误或多倍化现象不无关系, 当然并非完全排除不同种类个体之间的侧向的基因流动或整合的可能贡献。不难理解, DNA压缩机制的成型应该就是迈向真核生物的关键一步, 自然还伴随了细胞内部的结构分化、更为精巧而复杂的细胞分裂机制的发展, 等等。因此, 本文提出细胞核起源的新学说——压缩与结构化假说。此外, 从分子遗传学的角度来说, “性”一点都不神秘, 就是将两个个体的基因组拼在一起而已, 藉此种族多样的遗传信息分散到了个体之中; 而从生态的角度来看, “性”的原始动机就是与休眠事件的偶联。
谢平 . 细胞核和有性生殖是如何起源的?[J]. 生物多样性, 2016 , 24(8) : 966 -976 . DOI: 10.17520/biods.2016057
The origin of eukaryote is a fundamental, forbidding evolutionary puzzle, and the popular scenarios of eukaryogenesis are far from being clear. So far, there have been various theories (e.g., syntrophic model, autogenous model, viral eukaryogenesis model, exomembrane hypothesis), but few explain why. I observed that C-value (the amount of DNA contained within a haploid nucleus) increased by 3.5 orders of magnitude from prokaryote to eukaryotes, which is inconceivably close to the packing ratio of DNA in extant eukaryotes. Thus, it is never convincing to explain eukaryogenesis solely by using accident phagocytosis, symbiosis or parasitism (the influential endosymbiont theory unfortunately took the wrong turning!), but what is important is to explain why genome increased so sharply. This may be mainly related to DNA replication errors or polyploidization, of course not completely ruling out the possible contribution from lateral gene flow or genetic integration between individuals of different species. It is above suspicion that successful packing of DNA (finally into chromosome) was a key step towards eukaryogenesis, of course also accompanied with structural differentiation in cell and development of more subtle and complex cell division, and so on. This paper presents “packing and structurization hypothesis” to explain eukaryogenesis. In addition, from a molecular genetic point of view, sexual reproduction is never a mystery as it is just a process to merge two individual genomes, by which diverse genetic information of the species are dispersed into its individuals. On the other hand, from an ecological point of view, the original motivation of “sex” was accidently coupled with dormancy.
[1] | Bell G (1982) The Masterpiece of Nature: the Evolution and Genetics of Sexuality. University of California Press, Berkeley. |
[2] | Bell PJ (2001) Viral eukaryogenesis: was the ancestor of the nucleus a complex DNA virus? Journal of Molecular Evolution, 53, 251-256. |
[3] | Campbell NA, Reece JB (2008) Biology, 8th edn. Benjamin Cummings, San Francisco. |
[4] | Coyne JA (2009) Why Evolution is True. Viking Penguin, New York David LA, Alm EJ (2011) Rapid evolutionary innovation during an Archaean genetic expansion. Nature, 469, 93-96. |
[5] | de Roos AD (2006) The origin of the eukaryotic cell based on conservation of existing interfaces. Artificial Life, 12, 513-523. |
[6] | Ebert D (2005) Ecology, Epidemiology, and Evolution of Parasitism in Daphnia. National Library of Medicine (US), National Center for Biotechnology Information, Bethesda, MD. |
[7] | Fuerst JA (2005) Intracellular compartmentation in planctomycetes. Annual Review of Microbiology, 59, 299-328. |
[8] | Gregory TR (2004) Macroevolution, hierarchy theory, and the C-value enigma. Paleobiology, 30, 179-202. |
[9] | Hadany L, Comeron JM (2008) Why are sex and recombination so common? Annals of the New York Academy of Sciences, 1133, 26-43. |
[10] | Hogan CM (2010) Archaea. In: Encyclopedia of Earth (eds Monosson E, Cleveland C). National Council for Science and the Environment, Washington, DC. |
[11] | Jacob F (1998) Of Flies, Mice and Men (translated from the French edition). Harvard University Press, Cambridge MA. |
[12] | Koonin EV (2015) Origin of eukaryotes from within archaea, archaeal eukaryome and bursts of gene gain: eukaryogenesis just made easier? Philosophical Transactions of the Royal Society B, 370, 20140333. |
[13] | Margulis L (1981) Symbiosis in Cell Evolution, pp. 206-227. W. H. Freeman and Company, San Francisco. |
[14] | Martin WF, Garg S, Zimorski V (2015) Endosymbiotic theories for eukaryote origin. Philosophical Transactions of the Royal Society B, 370, 20140330. |
[15] | McInerney J, Pisani D, O’Connell MJ (2015) The ring of life hypothesis for eukaryote origins is supported by multiple kinds of data. Philosophical Transactions of the Royal Society B, 370, 20140323 |
[16] | Mereschkowsky K (1910) Theorie der zwei Plasmaarten als Grundlage der Symbiogenesis, einer neuen Lehre von der Entstehung der Organismen. Biologisches Centralblatt 30, 353-367. |
[17] | Moreira D, López-García P (2015) Evolution of viruses and cells: do we need a fourth domain of life to explain the origin of eukaryotes? Philosophical Transactions of the Royal Society B, 370, 20140327. |
[18] | Pennisi E (2004) Evolutionary biology. The birth of the nucleus. Science, 305, 766-768. |
[19] | Prescott DM (1994) The DNA of ciliated protozoa. Microbiological Reviews, 58, 233-267. |
[20] | Raven PH, Evert RF, Eichhorn SE (1992) Biology of Plants, 5th edn. Worth Publishers, New York. |
[21] | Schurko AM, Neiman M, Logsdon JM Jr (2008) Signs of sex: what we know and how we know it. Trends in Ecology & Evolution, 24, 208-217. |
[22] | Takemura M (2001) Poxviruses and the origin of the eukaryotic nucleus. Journal of Molecular Evolution, 52, 419-442. |
[23] | Villarreal L, DeFilippis V (2000) A hypothesis for DNA viruses as the origin of eukaryotic replication proteins. Journal of Virology, 74, 7079-7084. |
[24] | Wallin IE (1923) The mitochondria problem. The American Naturalist, 57, 255-261. |
[25] | Xie P (2013) Scaling Ecology to Understand Natural Design of Life Systems and Their Operations and Evolutions—Integration of Ecology, Genetics and Evolution Through Reproduction. Science Press, Beijing. |
[25] | [谢平 (2013) 从生态学透视生命系统的设计、运作与演化——生态、遗传和进化通过生殖的融合. 科学出版社, 北京.] |
[26] | Xie P (2014) The Aufhebung and Breakthrough of the Theories on the Origin and Evolution of Life—Life in Philosophy and Philosophy in Life Sciences. Science Press, Beijing. |
[26] | [谢平 (2014) 生命的起源-进化理论之扬弃与革新——哲学中的生命, 生命中的哲学. 科学出版社, 北京.] |
[27] | Zimmer C (2009) On the origin of sexual reproduction. Science, 324, 1254-1256. |
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